RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CENPUQ71F23 418 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PHYKPLQ8IUZ5 450 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PDIK1LQ8N165 341 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.91□□□□□ -0.98
SF3A1-206ENST00000471037 IPMKQ8NFU5 416 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 MRGPRX2Q96LB1 330 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 SERPINB12Q96P63 405 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 TBL1YQ9BQ87 522 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 TBC1D10AQ9BXI6 508 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 ARGLU1Q9NWB6 273 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-206ENST00000471037 UBP1Q9NZI7 540 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 CPNE7Q9UBL6 633 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 KLHL3Q9UH77 587 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 KCNK6Q9Y257 313 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PLAAQ9Y263 795 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 TP53TG5Q9Y2B4 290 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 PRKAB1Q9Y478 270 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 KCNMB2Q9Y691 235 aa8.91□□□□□ -0.98
SF3A1-206ENST00000471037 C1orf232A0A0U1RR37 186 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 LOC285095A0A1B0GVY8 99 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GPR89AB7ZAQ6 455 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 E7ESA3 106 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GOLGA8MH3BSY2 632 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GRID2O43424 1007 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 NDST3O95803 873 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 RECKO95980 971 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GPR89BP0CG08 455 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 MYBL2P10244 700 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 XRCC1P18887 633 aaPredicted RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 F8A1P23610 371 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ADRA1AP35348 466 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 MAGEA3P43357 314 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 MAPK9P45984 424 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 SPINT3P49223 89 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GFERP55789 205 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CDK18Q07002 472 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CDH17Q12864 832 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 SLMAPQ14BN4 828 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 PCSK7Q16549 785 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ATP1A1-AS1Q5TC04 95 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 C16orf46Q6P387 395 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 RANBP10Q6VN20 620 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ZNF534Q76KX8 674 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CAND1Q86VP6 1230 aaKnown RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 RELL1Q8IUW5 271 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 GSPT2Q8IYD1 628 aaKnown RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 LPCAT1Q8NF37 534 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 AENQ8WTP8 325 aaKnown RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CAVIN3Q969G5 261 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 LRRC39Q96DD0 335 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 C9orf72Q96LT7 481 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 PLEKHG4BQ96PX9 1271 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ADGRE3Q9BY15 652 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 FAM83DQ9H4H8 585 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ZNF768Q9H5H4 540 aaKnown RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 ARNT2Q9HBZ2 717 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 PKD2L2Q9NZM6 624 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 CHKBQ9Y259 395 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 PCDHB3Q9Y5E6 796 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 PCDHGA6Q9Y5G7 932 aa8.9□□□□□ -0.98
SF3A1-206ENST00000471037 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.98
SF3A1-206ENST00000471037 USP9YO00507 2555 aaPredicted RBP8.9□□□□□ -0.99
SF3A1-206ENST00000471037 NBASA2RRP1 2371 aa8.9□□□□□ -0.99
SF3A1-206ENST00000471037 MKRN2OSH3BPM6 223 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 CHUKO15111 745 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 SNX2O60749 519 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 RFPL1O75677 317 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 UBXN7O94888 489 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 AGTP01019 485 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 H2AFXP16104 143 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF28P17035 718 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 DLSTP36957 453 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 NPY2RP49146 381 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 FOXM1Q08050 763 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 SPARCL1Q14515 664 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 IL11RAQ14626 422 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 SLC1A5Q15758 541 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 PDPK2PQ6A1A2 396 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 C6orf15Q6UXA7 325 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-206ENST00000471037 TMEM26Q6ZUK4 368 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 PRSS42Q7Z5A4 293 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 ATCAYQ86WG3 371 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 CCDC25Q86WR0 208 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 DNAAF3Q8N9W5 541 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 OR52K1Q8NGK4 314 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 TRIB3Q96RU7 358 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 IL22Q9GZX6 179 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 PRDM8Q9NQV8 689 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 KLC4Q9NSK0 619 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 POT1Q9NUX5 634 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 BFARQ9NZS9 450 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 ATXN10Q9UBB4 475 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 NFKBIL1Q9UBC1 381 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-206ENST00000471037 KCND3Q9UK17 655 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms