RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 POLR1BQ9H9Y6 1135 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ARMCX1Q9P291 453 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 C2orf71A6NGG8 1288 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PSME3P61289 254 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ENDOVQ8N8Q3 282 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 MRPL43Q8N983 215 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ITFG1Q8TB96 612 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 TM6SF2Q9BZW4 377 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LEF1Q9UJU2 399 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 BTN3A1O00481 513 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 MYL12BO14950 172 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ITM2AO43736 263 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF30P17039 623 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ARF5P84085 180 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 NEDD8Q15843 81 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CASP12Q6UXS9 341 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CEP97Q8IW35 865 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 HERVK_113Q902F9 699 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LHX3Q9UBR4 397 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CAPN8A6NHC0 703 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LOC110117498-PIK3R3F6TDL0 507 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 H0YJX3 145 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 BUD23O43709 281 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 FAM20BO75063 409 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZMPSTE24O75844 475 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 NFATC1O95644 943 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 C7P10643 843 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 IL5RAQ01344 420 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 COX10Q12887 443 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LCP2Q13094 533 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PROSER1Q86XN7 944 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PIK3R3Q92569 461 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 RNFT2Q96EX2 444 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CYP4F12Q9HCS2 524 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 EVLQ9UI08 416 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 UBE2QL1A1L167 161 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 NEDD8-MDP1E9PL57 170 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 HAT1O14929 419 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 GABRB3P28472 473 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LMAN2Q12907 356 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 HIST2H2ACQ16777 129 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZFP69Q49AA0 526 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 HIST2H2AA3Q6FI13 130 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 DPP10Q8N608 796 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ATG16L2Q8NAA4 619 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ROPN1LQ96C74 230 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 SORT1Q99523 831 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LATS2Q9NRM7 1088 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 COL4A4P53420 1690 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 DPPA5A6NC42 116 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 STX16O14662 325 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PRAMEF1O95521 474 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 CD1DP15813 335 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MPSTP25325 297 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PPP2R1BP30154 601 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MNX1P50219 401 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 ARSDP51689 593 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 VAC14Q08AM6 782 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MYLK3Q32MK0 819 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 ALDH16A1Q8IZ83 802 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 LPGAT1Q92604 370 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 L3HYPDHQ96EM0 354 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 UBXN10Q96LJ8 280 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PLEKHG4BQ96PX9 1271 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 FAM126AQ9BYI3 521 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PLA2G4CQ9UP65 541 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 A0A0J9YYE9 177 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MUSKO15146 869 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 SLC22A1O15245 554 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MPZL2O60487 215 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 LILRB3O75022 631 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 TOP3BO95985 862 aaKnown RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 TRBC1P01850 177 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 TCF3P15923 654 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF284Q2VY69 593 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 FRMD7Q6ZUT3 714 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 GPSM1Q86YR5 675 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PGAM4Q8N0Y7 254 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 BADQ92934 168 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 PPP1R16AQ96I34 528 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 CCDC106Q9BWC9 280 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 ZDHHC6Q9H6R6 413 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 IFT80Q9P2H3 777 aaPredicted RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 TTC3P53804 2025 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 DHRS12A0PJE2 317 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 DCXO43602 365 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 GMFBP60983 142 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 MRPS22P82650 360 aaKnown RBP6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 ECT2LQ008S8 904 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 SCN1BQ07699 218 aa6.88□□□□□ -1.31
GAPVD1-215ENST00000470056 GAREM2Q75VX8 874 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms