RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HADHAP40939 763 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 CETN2P41208 172 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
CPSF4-210ENST00000469897 PDE1BQ01064 536 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 TCTN3Q6NUS6 607 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 SNX20Q7Z614 316 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 TMEM126BQ8IUX1 230 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 NXPE1Q8N323 547 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 ALG3Q92685 438 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 MR1Q95460 341 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 SPATA13Q96N96 652 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 TBL1YQ9BQ87 522 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 GPR87Q9BY21 358 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 ARNT2Q9HBZ2 717 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 PLAAQ9Y263 795 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 MAN2B2Q9Y2E5 1009 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 BOD1L1Q8NFC6 3051 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 C17orf113A0A1B0GUU1 675 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 RFPL1O75677 317 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 METTL18O95568 372 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 ITGALP20701 1170 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 PDHA2P29803 388 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 PRDX3P30048 256 aaKnown RBP12.92□□□□□ -0.34
CPSF4-210ENST00000469897 MC4RP32245 332 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 CCL11P51671 97 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 ZNF140P52738 457 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-210ENST00000469897 MLLT10P55197 1068 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 PRKAA1Q13131 559 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 PRKG2Q13237 762 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
CPSF4-210ENST00000469897 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 LCN10Q6JVE6 187 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 RAD9BQ6WBX8 426 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 TAS2R42Q7RTR8 314 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 TMTC1Q8IUR5 882 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 CLDN19Q8N6F1 224 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 ULK4Q96C45 1275 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 DNAJC1Q96KC8 554 aaKnown RBP12.92□□□□□ -0.34
CPSF4-210ENST00000469897 PANX2Q96RD6 677 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 TLR10Q9BXR5 811 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 TRIM55Q9BYV6 548 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 CHST8Q9H2A9 424 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 SOHLH2Q9NX45 425 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 ZDHHC3Q9NYG2 299 aa12.92□□□□□ -0.34
CPSF4-210ENST00000469897 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
CPSF4-210ENST00000469897 GSAPA4D1B5 854 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 BTN3A3O00478 584 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PDGFAP04085 211 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 KLK3P07288 261 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 CDH3P22223 829 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 NDUFS1P28331 727 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PTPN7P35236 360 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PRLHRP49683 370 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 ZNF75DP51815 510 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PMS2P54278 862 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 GPS2Q13227 327 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 UGT8Q16880 541 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PARP6Q2NL67 630 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PLEKHS1Q5SXH7 462 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 TAB3Q8N5C8 712 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 FAM71DQ8N9W8 422 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 ACVR1CQ8NER5 493 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 OR8K5Q8NH50 307 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 HM13Q8TCT9 377 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 HEXDCQ8WVB3 486 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 THAP4Q8WY91 577 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 KLHL25Q9H0H3 589 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 OR52A5Q9H2C5 316 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 C1GALT1Q9NS00 363 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
CPSF4-210ENST00000469897 HEBP2Q9Y5Z4 205 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 BSNQ9UPA5 3926 aa12.91□□□□□ -0.34
CPSF4-210ENST00000469897 MYO18BQ8IUG5 2567 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 BTNL10A8MVZ5 291 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 MEN1O00255 615 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 IFRD1O00458 451 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 PREPP48147 710 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 CHAF1BQ13112 559 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 IL10RAQ13651 578 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 LAMB3Q13751 1172 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 FAM69BQ5VUD6 431 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 ZNF517Q6ZMY9 492 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms