RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PTCHD3Q3KNS1 767 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ZNF789Q5FWF6 425 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 IZUMO3Q5VZ72 239 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ZDHHC20Q5W0Z9 365 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ARMC6Q6NXE6 501 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 BZW1Q7L1Q6 419 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 DSELQ8IZU8 1212 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ZBTB2Q8N680 514 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 Q8NA96 180 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 CLIP3Q96DZ5 547 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 C19orf60Q96EN9 201 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 FERD3LQ96RJ6 166 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 CD180Q99467 661 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 FAM118BQ9BPY3 351 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 NUDT9Q9BW91 350 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ZCCHC2Q9C0B9 1178 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 KIR3DX1Q9H7L2 352 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDAC3-204ENST00000469207 HACD3Q9P035 362 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 ACSL5Q9ULC5 683 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
HDAC3-204ENST00000469207 CCDC66A2RUB6 948 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 TMEM150CB9EJG8 249 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 HCRTR1O43613 425 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 KRT86O43790 486 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 TMEM63AO94886 807 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 KLK3P07288 261 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 CTSBP07858 339 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 ST6GAL1P15907 406 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 PDHA2P29803 388 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 PRDX3P30048 256 aaKnown RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 RORAP35398 523 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 TNNT3P45378 269 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 SPARCL1Q14515 664 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 KRT33BQ14525 404 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 JMJD6Q6NYC1 403 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 CYB5D1Q6P9G0 228 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 RANBP10Q6VN20 620 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 CCDC50Q8IVM0 306 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 GALNT11Q8NCW6 608 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 KRT35Q92764 455 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 XKR8Q9H6D3 395 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 PCMTD2Q9NV79 361 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 SMOXQ9NWM0 555 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 BTRCQ9Y297 605 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
HDAC3-204ENST00000469207 SHANK1Q9Y566 2161 aa11.92□□□□□ -0.5
HDAC3-204ENST00000469207 TEX15Q9BXT5 2789 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 GSAPA4D1B5 854 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 H7C0C1 242 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 BTN3A1O00481 513 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 CEACAM4O75871 244 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 ZRANB2O95218 330 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 SLC35G4P0C7Q5 338 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 ADRA1AP35348 466 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 ATP5OP48047 213 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 PREPP48147 710 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 PRKAA1Q13131 559 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 PRKG2Q13237 762 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 TAF1AQ15573 450 aaPredicted RBP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 PAPD7Q5XG87 772 aaKnown RBP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 FAM198BQ6UWH4 519 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 VSTM4Q8IW00 320 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 RCOR2Q8IZ40 523 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 ZFPM2Q8WW38 1151 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 LCN9Q8WX39 176 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 CPT1BQ92523 772 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 LINC00615Q96LM1 132 aaPredicted RBP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 QKIQ96PU8 341 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 VAT1Q99536 393 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 NLNQ9BYT8 704 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 SRMSQ9H3Y6 488 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 ACTR5Q9H9F9 607 aaPredicted RBP11.91□□□□□ -0.5
HDAC3-204ENST00000469207 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 MAP10Q9P2G4 905 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 POMT2Q9UKY4 750 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 COLEC10Q9Y6Z7 277 aa11.91□□□□□ -0.5
HDAC3-204ENST00000469207 C2orf81A6NN90 581 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ZNF749O43361 778 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 PSTPIP1O43586 416 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 MFAP3LO75121 409 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 RAB40ALP0C0E4 278 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ATP1B2P14415 290 aaPredicted RBP11.9□□□□□ -0.5
HDAC3-204ENST00000469207 PSMB4P28070 264 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 GSDMDP57764 484 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 TCEAL1Q15170 157 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
HDAC3-204ENST00000469207 BCL7AQ4VC05 210 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms