RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 ZNF611Q8N823 705 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 PAPD5Q8NDF8 572 aaKnown RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 MRGPRDQ8TDS7 321 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 TMEM143Q96AN5 459 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 ART5Q96L15 291 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 LINC00479Q96M42 142 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 CEP295NLQ96MC4 621 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 ZNF582Q96NG8 517 aaPredicted RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 OPRPNQ99935 248 aaPredicted RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 SRSF8Q9BRL6 282 aaKnown RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 PITPNM3Q9BZ71 974 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 RTN4RQ9BZR6 473 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 FTOQ9C0B1 505 aaKnown RBP eCLIP4.04□□□□□ -1.76
RBM39-226ENST00000468086 HRH4Q9H3N8 390 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 PELI2Q9HAT8 420 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 CHMP1AQ9HD42 196 aaPredicted RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 NPAP1Q9NZP6 1156 aa4.04□□□□□ -1.76
RBM39-226ENST00000468086 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
RBM39-226ENST00000468086 ZNF541Q9H0D2 1346 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 IGLV9-49A0A0B4J1Y8 123 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 A0A1W2PN81 502 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 MEIOCA2RUB1 952 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 PTGES3LE9PB15 166 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 SSX4O60224 188 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 PIGNO95427 931 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 FRMD6-AS1P0C7T7 363 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 CHRNA7P36544 502 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 WNT5AP41221 380 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 LGALS3BPQ08380 585 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 PLA2G7Q13093 441 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 PLEKHS1Q5SXH7 462 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 ZNF497Q6ZNH5 498 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 RPAP2Q8IXW5 612 aaPredicted RBP4.03□□□□□ -1.76
RBM39-226ENST00000468086 MAPK1IP1LQ8NDC0 245 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 HSD17B8Q92506 261 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 ERLEC1Q96DZ1 483 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 GMPPAQ96IJ6 420 aaPredicted RBP4.03□□□□□ -1.76
RBM39-226ENST00000468086 FAM81BQ96LP2 452 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 ZNF599Q96NL3 588 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 MYADMQ96S97 322 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 TREX2Q9BQ50 279 aaPredicted RBP4.03□□□□□ -1.76
RBM39-226ENST00000468086 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 SYNCQ9H7C4 482 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 BARHL2Q9NY43 387 aa4.03□□□□□ -1.76
RBM39-226ENST00000468086 COL2A1P02458 1487 aaPredicted RBP4.03□□□□□ -1.76
RBM39-226ENST00000468086 KIAA1210Q9ULL0 1709 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 A0A087X002 238 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 A0A1W2PRB8 838 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 ZBED4O75132 1171 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 AP2A2O94973 939 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 CEBPBP17676 345 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 GARSP41250 739 aaKnown RBP4.02□□□□□ -1.77
RBM39-226ENST00000468086 TAF6P49848 677 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 ARSEP51690 589 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 BMXP51813 675 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 MFAP4P55083 255 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 CDH11P55287 796 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 PPARDQ03181 441 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 CXCL9Q07325 125 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 PRKAA1Q13131 559 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 KRT33BQ14525 404 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 NR1D2Q14995 579 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 TAF13Q15543 124 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 DLG2Q15700 870 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 FFAR4Q5NUL3 377 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 GRTP1Q5TC63 336 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 FAM180BQ6P0A1 224 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 TBC1D1Q86TI0 1168 aaPredicted RBP4.02□□□□□ -1.77
RBM39-226ENST00000468086 TIGD1Q96MW7 591 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 OR6C1Q96RD1 312 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 ABHD6Q9BV23 337 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 ZNF71Q9NQZ8 489 aaPredicted RBP4.02□□□□□ -1.77
RBM39-226ENST00000468086 ATAD3AQ9NVI7 634 aa4.02□□□□□ -1.77
RBM39-226ENST00000468086 SPIN1Q9Y657 262 aaPredicted RBP4.02□□□□□ -1.77
RBM39-226ENST00000468086 PRSS51A0A1B0GVH4 220 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 VILLO15195 856 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 ZNF821O75541 412 aaPredicted RBP4.01□□□□□ -1.77
RBM39-226ENST00000468086 MMP9P14780 707 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 EFNA1P20827 205 aaPredicted RBP4.01□□□□□ -1.77
RBM39-226ENST00000468086 SLC6A6P31641 620 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 HADHAP40939 763 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 RXRGP48443 463 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 SUOXP51687 545 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 PNLIPRP2P54317 469 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 SIRPAP78324 504 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 PRKCZQ05513 592 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 IRF3Q14653 427 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 GTDC1Q4AE62 458 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 FAM98BQ52LJ0 330 aaKnown RBP4.01□□□□□ -1.77
RBM39-226ENST00000468086 RAB41Q5JT25 222 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 CORO6Q6QEF8 472 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 C4orf50Q6ZRC1 276 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 MOSPD2Q8NHP6 518 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 ZNF653Q96CK0 615 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 SAT2Q96F10 170 aaPredicted RBP4.01□□□□□ -1.77
RBM39-226ENST00000468086 NSL1Q96IY1 281 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 POM121L2Q96KW2 1035 aa4.01□□□□□ -1.77
RBM39-226ENST00000468086 NEK1Q96PY6 1258 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms