RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ANKRD28O15084 1053 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SLC16A5O15375 505 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 TSPAN1O60635 241 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 NDUFS7O75251 213 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 MED24O75448 989 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SLC22A3O75751 556 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 GLUD1P00367 558 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 RAB40ALP0C0E4 278 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 FAM58BPP0C7Q3 252 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 STMN1P16949 149 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 NAGAP17050 411 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 PSMA3P25788 255 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 PTPN3P26045 913 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ATP6V1E1P36543 226 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 RPL3P39023 403 aaKnown RBP4.04□□□□□ -1.76
SMC4-208ENST00000467468 GLUD2P49448 558 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 NUDT6P53370 316 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
SMC4-208ENST00000467468 C17orf67Q0P5P2 114 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 COASYQ13057 564 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 TRAF1Q13077 416 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 HLFQ16534 295 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 C2orf76Q3KRA6 126 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ANKRD20A4Q4UJ75 823 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 KRTCAP3Q53RY4 240 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 TDRD12Q587J7 1177 aaKnown RBP4.04□□□□□ -1.76
SMC4-208ENST00000467468 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ANKRD20A2Q5SQ80 823 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ANKRD20A1Q5TYW2 823 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ANKRD20A3Q5VUR7 823 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 C18orf63Q68DL7 685 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 C8orf82Q6P1X6 216 aaPredicted RBP4.04□□□□□ -1.76
SMC4-208ENST00000467468 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 FIGLAQ6QHK4 219 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ZBTB49Q6ZSB9 765 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 C11orf57Q6ZUT1 292 aaPredicted RBP4.04□□□□□ -1.76
SMC4-208ENST00000467468 TUSC5Q8IXB3 177 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 MIGA1Q8NAN2 632 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 OR2AK2Q8NG84 335 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 OR8H1Q8NGG4 311 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 DNAAF4Q8WXU2 420 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SLAMF9Q96A28 289 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 CABS1Q96KC9 395 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 OR6C1Q96RD1 312 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SEPHS2Q99611 448 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SEMA3CQ99985 751 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 KXD1Q9BQD3 176 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 INPP5KQ9BT40 448 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 TM6SF1Q9BZW5 370 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 IL1RAPL2Q9NP60 686 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ABCB8Q9NUT2 735 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 CACNG4Q9UBN1 327 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SNX7Q9UNH6 387 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 NME7Q9Y5B8 376 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ATXN2Q99700 1313 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 IGHV4-28A0A0C4DH34 117 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 A0A1W2PPQ1 181 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 LRRD1A4D1F6 860 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 TMEM221A6NGB7 291 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 OOEPA6NGQ2 149 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 DDX39AO00148 427 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 CLDN4O14493 209 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 TO15178 435 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CAMTA2O94983 1202 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 MT-ND3P03897 115 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 THEGLP0DJG4 465 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CYP11B2P19099 503 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 GABRA5P31644 462 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 AMTP48728 403 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CTSCP53634 463 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CLDN20P56880 219 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 PRKCZQ05513 592 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 AP1B1Q10567 949 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 ITGA7Q13683 1181 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 HNF4GQ14541 408 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 RRS1Q15050 365 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 PKN2Q16513 984 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 CTF1Q16619 201 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 AMZ1Q400G9 498 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 SHEQ5VZ18 495 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 ALS2CLQ60I27 953 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 ZNF324BQ6AW86 544 aaPredicted RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 NADSYN1Q6IA69 706 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CAPRIN2Q6IMN6 1127 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 C15orf39Q6ZRI6 1047 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 SPATA21Q7Z572 469 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 HOOK3Q86VS8 718 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CHERPQ8IWX8 916 aaKnown RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 SYCP3Q8IZU3 236 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 NDUFAF2Q8N183 169 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 SLC4A11Q8NBS3 891 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 CTCFLQ8NI51 663 aaPredicted RBP4.03□□□□□ -1.76
SMC4-208ENST00000467468 THAP6Q8TBB0 222 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 NUDCD2Q8WVJ2 157 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 RND1Q92730 232 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 EXOC4Q96A65 974 aa4.03□□□□□ -1.76
SMC4-208ENST00000467468 SPDL1Q96EA4 605 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms