RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 DNAJB5O75953 348 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CD6P30203 668 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 GPR15P49685 360 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 DNASE1L3Q13609 305 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 NR6A1Q15406 480 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 AP5B1Q2VPB7 878 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 AADATQ8N5Z0 425 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 OR7A2PQ8NGA2 310 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 FBLIM1Q8WUP2 373 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CORO1BQ9BR76 489 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 BTBD2Q9BX70 525 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 SLC25A37Q9NYZ2 338 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 NDST3O95803 873 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 TBX18O95935 607 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CHRNA1P02708 482 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 PFKLP17858 780 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 TSPY1Q01534 308 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF235Q14590 738 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 ABRAXAS2Q15018 415 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 BCL2A1Q16548 175 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF362Q5T0B9 420 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 AGAP7PQ5VUJ5 663 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 AFTPHQ6ULP2 937 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 SLC13A3Q8WWT9 602 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 GTF2H4Q92759 462 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 PTPN18Q99952 460 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 TBCDQ9BTW9 1192 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 THUMPD3Q9BV44 507 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 FLRT1Q9NZU1 646 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 AASSQ9UDR5 926 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 PCDHGB1Q9Y5G3 927 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 NADKO95544 446 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 GSTT2P0CG29 244 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 GSTT2BP0CG30 244 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 PKMP14618 531 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 HOXC8P31273 242 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 MAP2K4P45985 399 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 EFEMP1Q12805 493 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 RAPSNQ13702 412 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 PTGR1Q14914 329 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 INAQ16352 499 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 PGS1Q32NB8 556 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 PAGE2BQ5JRK9 111 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 TMEM236Q5W0B7 351 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 DSG4Q86SJ6 1040 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 OR5K1Q8NHB7 308 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 SLX1AQ9BQ83 275 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 C3orf18Q9UK00 162 aa12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 INTS6Q9UL03 887 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-205ENST00000466780 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 CXCR6O00574 342 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 OR7A17O14581 309 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 SLC16A6O15403 523 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 KATNA1O75449 491 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 CCDC159P0C7I6 412 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 RYKP34925 604 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 VBP1P61758 197 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 PON2Q15165 354 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 CCL14Q16627 93 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 PARP15Q460N3 678 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 LAIR1Q6GTX8 287 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 DNAJC14Q6Y2X3 702 aaPredicted RBP12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 LINC00299Q6ZSB3 139 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 MON1AQ86VX9 555 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 OR4F6Q8NGB9 312 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 MCOLN3Q8TDD5 553 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 HPS1Q92902 700 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 ZNF566Q969W8 418 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 FAM162AQ96A26 154 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 YIPF6Q96EC8 236 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 PDFQ9HBH1 243 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 FBXO8Q9NRD0 319 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 CCL27Q9Y4X3 112 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 U3KQV3 271 aa12.77□□□□□ -0.37
PDZRN3-205ENST00000466780 ELOVL7A1L3X0 281 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms