RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PRSS51A0A1B0GVH4 220 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A1W2PPQ1 181 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 TMEM221A6NGB7 291 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 C4orf47A7E2U8 309 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 HNRNPCL2B2RXH8 293 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 PDE9AO76083 593 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 CELF2O95319 508 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 TFAP2AP05549 437 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 NGFRP08138 427 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 RAB40ALP0C0E4 278 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 CSF2RAP15509 400 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 PSMA3P25788 255 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 ASCL1P50553 236 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 KRT83P78385 493 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 TROAPQ12815 778 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 GAGE5Q13069 117 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 GAGE6Q13070 117 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 SLC39A14Q15043 492 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 ASPRV1Q53RT3 343 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR7E24Q6IFN5 339 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 PET117Q6UWS5 81 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 UNQ6126/PRO20091Q6UXV3 157 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 PTOV1Q86YD1 416 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 IQUBQ8NA54 791 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR2AJ1Q8NGZ0 328 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 ROBO4Q8WZ75 1007 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 SEMA4DQ92854 862 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF582Q96NG8 517 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 FNDC11Q9BVV2 318 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 DPAGT1Q9H3H5 408 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 CD93Q9NPY3 652 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 ARGLU1Q9NWB6 273 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 RHCGQ9UBD6 479 aa4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 SOS1Q07889 1333 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-211ENST00000466538 IGHV4OR15-8A0A075B7B6 117 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A0G2JNG1 304 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A1W2PPM1 405 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 CTAGE9A4FU28 777 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 ASPDHA6ND91 283 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 ANXA2P2A6NMY6 339 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 TMEM178BH3BS89 294 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PTGESO14684 152 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SMAD6O43541 496 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SYNCRIPO60506 623 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 DIAPH2O60879 1101 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SLCO2B1O94956 709 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SIX3O95343 332 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 H1F0P07305 194 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR52Z1P0C646 297 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 CTAGE8P0CG41 777 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 CDH1P12830 882 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 HLA-DOBP13765 273 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 HOXC13P31276 330 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SLC6A6P31641 620 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 ART1P52961 327 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PPARDQ03181 441 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 EEF1A2Q05639 463 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 KIR2DS5Q14953 304 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 DUOXA1Q1HG43 343 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 KLHL26Q53HC5 615 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 C6orf136Q5SQH8 315 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 GRTP1Q5TC63 336 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 IRAK1BP1Q5VVH5 260 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PRR27Q6MZM9 219 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 DCLRE1AQ6PJP8 1040 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PLXDC2Q6UX71 529 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PACS1Q6VY07 963 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 TUBA1AQ71U36 451 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 MEPCEQ7L2J0 689 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 GLRX5Q86SX6 157 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 CTAGE4Q8IX94 777 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 GPALPP1Q8IXQ4 340 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR8H3Q8N146 312 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 L3MBTL4Q8NA19 623 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SPDL1Q96EA4 605 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 MED30Q96HR3 178 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 SFXN2Q96NB2 322 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 FEVQ99581 238 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 MEIS3Q99687 375 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 CITED2Q99967 270 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 TUBA1CQ9BQE3 449 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 LRRC1Q9BTT6 524 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 MIOSQ9NXC5 875 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 MALT1Q9UDY8 824 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 PCSK5Q92824 1860 aa4.17□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A087WV48 116 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 A0A1W2PS18 150 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 LACTBL1A8MY62 500 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 TRIM77I1YAP6 450 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 CCER2I3L3R5 266 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 OVOL3O00110 214 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 CLDN4O14493 209 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 OR10H2O60403 315 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 GCNT3O95395 438 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZBTB11O95625 1053 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 T-ENOLP0DO92 83 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 SNHG28P0DPA3 235 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ITGA2P17301 1181 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 CDC25CP30307 473 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms