RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SPARCL1Q14515 664 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 TMTC4Q5T4D3 741 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 CAPRIN2Q6IMN6 1127 aaKnown RBP18.66■□□□□ 0.58
COL9A3-206ENST00000466532 AADACL2Q6P093 401 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 SNX20Q7Z614 316 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 TMEM126BQ8IUX1 230 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 CARFQ8N187 725 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 LRRC45Q96CN5 670 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 CCM2Q9BSQ5 444 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 TUBB2BQ9BVA1 445 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 GPR87Q9BY21 358 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 HEBP2Q9Y5Z4 205 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 DUSP10Q9Y6W6 482 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 CCDC88CQ9P219 2028 aa18.66■□□□□ 0.58
COL9A3-206ENST00000466532 CFAP99D6REC4 459 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 K7EM74 188 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 CCL22O00626 93 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 TJP3O95049 919 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 ATP1B2P14415 290 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-206ENST00000466532 POLR2CP19387 275 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-206ENST00000466532 RPS18P62269 152 aaKnown RBP18.65■□□□□ 0.58
COL9A3-206ENST00000466532 PRKAA1Q13131 559 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 DENND5AQ6IQ26 1287 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 TCTN3Q6NUS6 607 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 FBXO38Q6PIJ6 1188 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 OR4E2Q8NGC2 313 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 HEXDCQ8WVB3 486 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 SEC14L1Q92503 715 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 ZNF501Q96CX3 271 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-206ENST00000466532 PPM1MQ96MI6 270 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 PANX2Q96RD6 677 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 C19orf43Q9BQ61 176 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 ARNT2Q9HBZ2 717 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 KCND1Q9NSA2 647 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 FEZ2Q9UHY8 353 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-206ENST00000466532 TLK1Q9UKI8 766 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 BTRCQ9Y297 605 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 NBASA2RRP1 2371 aa18.65■□□□□ 0.58
COL9A3-206ENST00000466532 SNRNP200O75643 2136 aaKnown RBP18.64■□□□□ 0.57
COL9A3-206ENST00000466532 COL12A1Q99715 3063 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 LDB2O43679 373 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 CDH3P22223 829 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 PTPN4P29074 926 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 MC4RP32245 332 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 RPS15P62841 145 aaKnown RBP18.64■□□□□ 0.57
COL9A3-206ENST00000466532 TMTC1Q8IUR5 882 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 APLFQ8IW19 511 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-206ENST00000466532 ACVR1CQ8NER5 493 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 OR8K5Q8NH50 307 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 ALG3Q92685 438 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 MR1Q95460 341 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 FERD3LQ96RJ6 166 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 COG4Q9H9E3 785 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 POMT2Q9UKY4 750 aa18.64■□□□□ 0.57
COL9A3-206ENST00000466532 SPENQ96T58 3664 aaKnown RBP18.63■□□□□ 0.57
COL9A3-206ENST00000466532 FER1L5A0AVI2 2057 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 C17orf113A0A1B0GUU1 675 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 GSAPA4D1B5 854 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 SLC9B1P1A6NJY1 282 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 BTNL10A8MVZ5 291 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 DNAJB5O75953 348 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 CDKN1CP49918 316 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-206ENST00000466532 GPS2Q13227 327 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 SEMA5AQ13591 1074 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 UGT8Q16880 541 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 GPR33Q49SQ1 333 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 ZRANB3Q5FWF4 1079 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 ASB18Q6ZVZ8 466 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 SYVN1Q86TM6 617 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 TEX19Q8NA77 164 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 LCN9Q8WX39 176 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 DNAJC1Q96KC8 554 aaKnown RBP18.63■□□□□ 0.57
COL9A3-206ENST00000466532 TLR10Q9BXR5 811 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 SRMSQ9H3Y6 488 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 FANCEQ9HB96 536 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 LATS2Q9NRM7 1088 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 C1GALT1Q9NS00 363 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 ZDHHC3Q9NYG2 299 aa18.63■□□□□ 0.57
COL9A3-206ENST00000466532 FARSAQ9Y285 508 aaKnown RBP18.63■□□□□ 0.57
COL9A3-206ENST00000466532 REXO2Q9Y3B8 237 aaKnown RBP18.63■□□□□ 0.57
COL9A3-206ENST00000466532 MATN2O00339 956 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 IFRD1O00458 451 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-206ENST00000466532 DDX3YO15523 660 aaKnown RBP18.62■□□□□ 0.57
COL9A3-206ENST00000466532 ZNF189O75820 626 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-206ENST00000466532 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
COL9A3-206ENST00000466532 ACRV1P26436 265 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 ARHGEF18Q6ZSZ5 1173 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 MICALCLQ6ZW33 695 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 SERPINA9Q86WD7 417 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 LRRC57Q8N9N7 239 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 THAP4Q8WY91 577 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 TRIM55Q9BYV6 548 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 LACRTQ9GZZ8 138 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 OR52A5Q9H2C5 316 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 VPS37BQ9H9H4 285 aa18.62■□□□□ 0.57
COL9A3-206ENST00000466532 IGLV3-16A0A075B6K0 115 aa18.61■□□□□ 0.57
COL9A3-206ENST00000466532 TRBV5-4A0A0C4DH59 114 aa18.61■□□□□ 0.57
COL9A3-206ENST00000466532 GRID2IPA4D2P6 1211 aa18.61■□□□□ 0.57
COL9A3-206ENST00000466532 GOLGA6L9A6NEM1 432 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms