RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CHD8Q9HCK8 2581 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 ACACBO00763 2458 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 IGLV3-16A0A075B6K0 115 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 LILRA5A6NI73 299 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 PRR19A6NJB7 356 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 EFCAB7A8K855 629 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 IQCF5A8MTL0 148 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 TMX2-CTNND1H3BSU7 103 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 KCNJ13O60928 360 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 RASSF9O75901 435 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 THRAP10827 490 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 MTHFD1P11586 935 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 IGF2RP11717 2491 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 OAS2P29728 719 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 PDHA2P29803 388 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 CSTF2P33240 577 aaKnown RBP eCLIP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 EIF2S3P41091 472 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 SEPHS1P49903 392 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 LIMK2P53671 638 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 EPHA4P54764 986 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 PCBP4P57723 403 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 MRPS25P82663 173 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 ITIH4Q14624 930 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 COL28A1Q2UY09 1125 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 SYTL3Q4VX76 610 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 SDK2Q58EX2 2172 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 AGAP9Q5VTM2 703 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 IZUMO3Q5VZ72 239 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 IRGCQ6NXR0 463 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 LRRC69Q6ZNQ3 347 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 FAM92BQ6ZTR7 304 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 IFT20Q8IY31 132 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 AVL9Q8NBF6 648 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 OR4D9Q8NGE8 314 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 LKAAEAR1Q8TD35 194 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 FGF11Q92914 225 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 PMEPA1Q969W9 287 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 LINC00615Q96LM1 132 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 SERPINB12Q96P63 405 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 FERD3LQ96RJ6 166 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 TTC1Q99614 292 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 C19orf43Q9BQ61 176 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 TRIM51Q9BSJ1 452 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 CCM2Q9BSQ5 444 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 TRIM31Q9BZY9 425 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 VPS37BQ9H9H4 285 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 ASCL3Q9NQ33 180 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 THSD1Q9NS62 852 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 OCIAD1Q9NX40 245 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 SAMD15Q9P1V8 674 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 DKK4Q9UBT3 224 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 PCDHGA8Q9Y5G5 932 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 MAD1L1Q9Y6D9 718 aa9.52□□□□□ -0.89
RTFDC1-205ENST00000466260 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 AP3B1O00203 1094 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 IFRD1O00458 451 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CD3EAPO15446 510 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 RRP8O43159 456 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 PRAMEF10O60809 474 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 NDUFS3O75489 264 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 BANF1O75531 89 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 VAPBO95292 243 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 FTH1P02794 183 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ITGA2BP08514 1039 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 OR56A5P0C7T3 313 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC5A2P31639 672 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ABCG1P45844 678 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 LEPRP48357 1165 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 PPP1CAP62136 330 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CDK16Q00536 496 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ACVR1Q04771 509 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 C2orf54Q08AI8 447 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 EIF3IQ13347 325 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CASP8Q14790 479 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 METRNLQ641Q3 311 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF449Q6P9G9 518 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 XKR5Q6UX68 686 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 WASH2PQ6VEQ5 465 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 NLRP9Q7RTR0 991 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CAND1Q86VP6 1230 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CREG2Q8IUH2 290 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 LRRN4CLQ8ND94 238 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF248Q8NDW4 579 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ANKK1Q8NFD2 765 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 KCNE4Q8WWG9 221 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 USP7Q93009 1102 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ART4Q93070 314 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 FAM136AQ96C01 138 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 GRAMD1AQ96CP6 724 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF578Q96N58 590 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC46A1Q96NT5 459 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 RUFY1Q96T51 708 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 CTRCQ99895 268 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 HGH1Q9BTY7 390 aa9.51□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC40A1Q9NP59 571 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms