RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 OAS3Q9Y6K5 1087 aaKnown RBP18.3■□□□□ 0.52
CAPN3-209ENST00000466222 OR2AG2A6NM03 316 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 SLC31A1O15431 190 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 SGTAO43765 313 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 C7P10643 843 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 THRAP10827 490 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 NSG1P42857 185 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CLCN7P51798 805 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 DPTQ07507 201 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 PRKAA1Q13131 559 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 PDAP1Q13442 181 aaKnown RBP18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CUL3Q13618 768 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 TMEM259Q4ZIN3 620 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 LYPLAL1Q5VWZ2 237 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 USP30Q70CQ3 517 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 FBXW8Q8N3Y1 598 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 TMEM151AQ8N4L1 468 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 FAM160A2Q8N612 972 aaPredicted RBP18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CD200R1Q8TD46 325 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 ULK4Q96C45 1275 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 UBXN10Q96LJ8 280 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 GATA5Q9BWX5 397 aaPredicted RBP18.29■□□□□ 0.52
CAPN3-209ENST00000466222 ITM2CQ9NQX7 267 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 RAD18Q9NS91 495 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 FZD4Q9ULV1 537 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 SCML1Q9UN30 329 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CYP8B1Q9UNU6 501 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 E5RI56 91 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 H3BMM5 538 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 HDAC3O15379 428 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 PPARGP37231 505 aaPredicted RBP18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CTSCP53634 463 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 MTTPP55157 894 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 RPS21P63220 83 aaKnown RBP18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CDC16Q13042 620 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 MTAPQ13126 283 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 INPP5AQ14642 412 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 C16orf89Q6UX73 402 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 RASGEF1AQ8N9B8 481 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 DDHD1Q8NEL9 900 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 TSTD1Q8NFU3 115 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 KCNJ9Q92806 393 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 TSPAN17Q96FV3 270 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 SERPINI1Q99574 410 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 SLC17A9Q9BYT1 436 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 FAM192AQ9GZU8 254 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 IKZF3Q9UKT9 509 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 OR1A2Q9Y585 309 aa18.29■□□□□ 0.52
CAPN3-209ENST00000466222 CKAP5Q14008 2032 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 TK2O00142 265 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 MATN2O00339 956 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 DCXO43602 365 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 PI15O43692 258 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 AHCYL1O43865 530 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 SBK3P0C264 359 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 ATP1B2P14415 290 aaPredicted RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 ZNF37AP17032 561 aaPredicted RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 RPS3P23396 243 aaKnown RBP eCLIP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 KCNC1P48547 511 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 RPL14P50914 215 aaKnown RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 TBL3Q12788 808 aaKnown RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 CCNIQ14094 377 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 HERC3Q15034 1050 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 VWA5B1Q5TIE3 1220 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 PNCKQ6P2M8 343 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 ACAD11Q709F0 780 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 ZNF765Q7L2R6 523 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 KBTBD6Q86V97 674 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 CPNE9Q8IYJ1 553 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 DEFB107AQ8IZN7 70 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 FSTL5Q8N475 847 aaPredicted RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 CPSF7Q8N684 471 aaKnown RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 VPS35Q96QK1 796 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 NELL2Q99435 816 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 C1QTNF2Q9BXJ5 285 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 BCAP29Q9UHQ4 241 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 POMPQ9Y244 141 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 TMEM98Q9Y2Y6 226 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 PCYT1BQ9Y5K3 369 aaPredicted RBP18.28■□□□□ 0.52
CAPN3-209ENST00000466222 DMDP11532 3685 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 WDFY4Q6ZS81 3184 aa18.28■□□□□ 0.52
CAPN3-209ENST00000466222 PEX1O43933 1283 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 VPS26AO75436 327 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 FESP07332 822 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 KPNA2P52292 529 aaKnown RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 TMEM115Q12893 351 aaPredicted RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 SGCGQ13326 291 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 IRF4Q15306 451 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 SLC9B1Q4ZJI4 515 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 MACC1Q6ZN28 852 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 FRMD7Q6ZUT3 714 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 HORMAD1Q86X24 394 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 TP53I13Q8NBR0 393 aaPredicted RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 RP9Q8TA86 221 aaKnown RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 EEF1AKMT1Q8WVE0 214 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 MOCOSQ96EN8 888 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 DCUN1D1Q96GG9 259 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 YIPF3Q9GZM5 350 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 BTBD1Q9H0C5 482 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms