RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PLOD1Q02809 727 aaPredicted RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 SLC18A2Q05940 514 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 HSPA14Q0VDF9 509 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ILF3Q12906 894 aaKnown RBP eCLIP10.91□□□□□ -0.66
VCP-204ENST00000466100 C1orf61Q13536 156 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TCEA2Q15560 299 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TTLL9Q3SXZ7 439 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 AGAP9Q5VTM2 703 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CAPRIN2Q6IMN6 1127 aaKnown RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CYHR1Q6ZMK1 362 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 NEK10Q6ZWH5 1172 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 PIWIL4Q7Z3Z4 852 aaKnown RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 CCDC91Q7Z6B0 441 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CFAP206Q8IYR0 622 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 FSTL5Q8N475 847 aaPredicted RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 ACMSDQ8TDX5 336 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 EEF1AKMT1Q8WVE0 214 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TLCD1Q96CP7 247 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 LINGO1Q96FE5 620 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 PDLIM5Q96HC4 596 aaKnown RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 RMDN2Q96LZ7 410 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 RUFY1Q96T51 708 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 NUSAP1Q9BXS6 441 aaKnown RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 GSDMCQ9BYG8 508 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 WASH6PQ9NQA3 447 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 IGSF5Q9NSI5 407 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 MKS1Q9NXB0 559 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TAAR2Q9P1P5 351 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 SPASTQ9UBP0 616 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TBC1D29Q9UFV1 150 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 GMEB2Q9UKD1 530 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 IKZF3Q9UKT9 509 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ACSL5Q9ULC5 683 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 WDR37Q9Y2I8 494 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CSNK1G3Q9Y6M4 447 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 COL5A1P20908 1838 aaPredicted RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 CEP250Q9BV73 2442 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 A0A087X1B8 175 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 KHNYNO15037 678 aaKnown RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 YKT6O15498 198 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 DFNA5O60443 496 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SDC3O75056 442 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 MATN4O95460 622 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 CER1O95813 267 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 TOP3BO95985 862 aaKnown RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 MT-ND3P03897 115 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 MPOP05164 745 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SYPP08247 313 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 MPC1LP0DKB6 136 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PYGBP11216 843 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 CTSEP14091 401 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 KRT15P19012 456 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 ARRB1P49407 418 aaPredicted RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 IL2P60568 153 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 BNIP3Q12983 259 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 ELOCQ15369 112 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SYTL3Q4VX76 610 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 TAF1BQ53T94 588 aaPredicted RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 AGBL2Q5U5Z8 902 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SLC30A9Q6PML9 568 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 ABRAXAS1Q6UWZ7 409 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PDZD3Q86UT5 571 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 EXOC3L1Q86VI1 746 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PLD6Q8N2A8 252 aaKnown RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 SDR16C5Q8N3Y7 309 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SLC25A45Q8N413 288 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 NKAPQ8N5F7 415 aaKnown RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 OR2I1PQ8NGU4 316 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 LMX1AQ8TE12 382 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SAP25Q8TEE9 199 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 KCTD4Q8WVF5 259 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 TMEM159Q96B96 161 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 ARL8AQ96BM9 186 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 CABS1Q96KC9 395 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 GPR78Q96P69 363 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 DERL2Q9GZP9 239 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 WWP1Q9H0M0 922 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 OSGEPL1Q9H4B0 414 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 GAREM1Q9H706 876 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SYTL2Q9HCH5 934 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PRDM8Q9NQV8 689 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 PCMTD2Q9NV79 361 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SCHIP1Q9P0W5 487 aaPredicted RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 RUVBL2Q9Y230 463 aaKnown RBP10.9□□□□□ -0.66
VCP-204ENST00000466100 ACOT9Q9Y305 439 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 RP1P56715 2156 aa10.9□□□□□ -0.66
VCP-204ENST00000466100 SNRNP200O75643 2136 aaKnown RBP10.9□□□□□ -0.67
VCP-204ENST00000466100 GOLGA8RI6L899 631 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 YY2O15391 372 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 KLHL2O95198 593 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 SYF2O95926 243 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 LTA4HP09960 611 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 CCDC166P0CW27 439 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 COL6A2P12110 1019 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 F3P13726 295 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms