RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 FOXP3Q9BZS1 431 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 EPB41L5Q9HCM4 733 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 PPANQ9NQ55 473 aaKnown RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 POT1Q9NUX5 634 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 PCM1Q15154 2024 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 BHMG1C9JSJ3 638 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 AGRPO00253 132 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 IFRD1O00458 451 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 HAUS5O94927 633 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CPNE6O95741 557 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 ESR1P03372 595 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SPTBP11277 2137 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 PKMP14618 531 aaKnown RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 TYRP1P17643 537 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 MPSTP25325 297 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 AOAHP28039 575 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 PDX1P52945 283 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 GPLD1P80108 840 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CBLBQ13191 982 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 KRT33BQ14525 404 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 ZNF574Q6ZN55 896 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CAPN12Q6ZSI9 719 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CCDC25Q86WR0 208 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 LMNTD2Q8IXW0 634 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 PYROXD1Q8WU10 500 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SEC14L1Q92503 715 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 NCSTNQ92542 709 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 FAM136AQ96C01 138 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 CERS2Q96G23 380 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 PANX3Q96QZ0 392 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 FERD3LQ96RJ6 166 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 FAM167BQ9BTA0 163 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SEMA6CQ9H3T2 930 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 INTS10Q9NVR2 710 aaKnown RBP12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 ENTPD2Q9Y5L3 495 aa12.09□□□□□ -0.47
CHPF2-202ENST00000465601 SNRNP200O75643 2136 aaKnown RBP12.08□□□□□ -0.47
CHPF2-202ENST00000465601 LILRA5A6NI73 299 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 H3BMM5 538 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 DUX1O43812 170 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 GPC4O75487 556 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 APOA4P06727 396 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 PROS1P07225 676 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 AMD1P17707 334 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 CHRM3P20309 590 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ACADLP28330 430 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 CSF2RBP32927 897 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 CD151P48509 253 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 EPHA4P54764 986 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 INHBCP55103 352 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ADARP55265 1226 aaKnown RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ZFP36L1Q07352 338 aaKnown RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 SQSTM1Q13501 440 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ZNF549Q6P9A3 640 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 CNSTQ6PJW8 725 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 PDZD3Q86UT5 571 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 VRK3Q8IV63 474 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 PALM2Q8IXS6 379 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 RBM12BQ8IXT5 1001 aaKnown RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 C2CD4AQ8NCU7 369 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ASZ1Q8WWH4 475 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 TFGQ92734 400 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-202ENST00000465601 ZMYND15Q9H091 742 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 FAM114A2Q9NRY5 505 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 TMEM9Q9P0T7 183 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 GALPQ9UBC7 116 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 HEBP2Q9Y5Z4 205 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 COLEC10Q9Y6Z7 277 aa12.08□□□□□ -0.48
CHPF2-202ENST00000465601 TMX2-CTNND1H3BSU7 103 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SEC16AO15027 2179 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 UBXN7O94888 489 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 AHSGP02765 367 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 GABRB3P28472 473 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 SSTR1P30872 391 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 MAGEA4P43358 317 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 ABCG1P45844 678 aa12.07□□□□□ -0.48
CHPF2-202ENST00000465601 LEPRP48357 1165 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms