RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SEMA3AQ14563 771 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 KCNAB1Q14722 419 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 NLGN4XQ8N0W4 816 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 PRELID2Q8N945 189 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 NLGN4YQ8NFZ3 816 aaPredicted RBP21.22■□□□□ 0.99
LIME1-203ENST00000465591 ZFPM2Q8WW38 1151 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 EXTL1Q92935 676 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 SLC41A2Q96JW4 573 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 HRASLS2Q9NWW9 162 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 TCAF1Q9Y4C2 921 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 OR6C74A6NCV1 312 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 OR1I1O60431 355 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 FOLR1P15328 257 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 ITIH4Q14624 930 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 KLHL35Q6PF15 583 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 FBXO38Q6PIJ6 1188 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 PACS1Q6VY07 963 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 NAPRTQ6XQN6 538 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 EXD3Q8N9H8 876 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 PHC3Q8NDX5 983 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 RIMKLBQ9ULI2 386 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
LIME1-203ENST00000465591 TLN1Q9Y490 2541 aaKnown RBP21.21■□□□□ 0.99
LIME1-203ENST00000465591 AP2A2O94973 939 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 TIAF1O95411 115 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 GAS8O95995 478 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 NSG1P42857 185 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 KPNA2P52292 529 aaKnown RBP21.2■□□□□ 0.98
LIME1-203ENST00000465591 CRADDP78560 199 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 DNTTIP2Q5QJE6 756 aaKnown RBP21.2■□□□□ 0.98
LIME1-203ENST00000465591 AFTPHQ6ULP2 937 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 OOSP2Q86WS3 158 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 OR4E2Q8NGC2 313 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 UBXN4Q92575 508 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 FERD3LQ96RJ6 166 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 ULBP3Q9BZM4 244 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 VPS37BQ9H9H4 285 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 EIF2B3Q9NR50 452 aaKnown RBP21.2■□□□□ 0.98
LIME1-203ENST00000465591 IL17BQ9UHF5 180 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 COLEC10Q9Y6Z7 277 aa21.2■□□□□ 0.98
LIME1-203ENST00000465591 SNRNP200O75643 2136 aaKnown RBP21.2■□□□□ 0.98
LIME1-203ENST00000465591 HELZ2Q9BYK8 2649 aaKnown RBP21.19■□□□□ 0.98
LIME1-203ENST00000465591 TCRBV7S3A2A0A539 114 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 TLCD2A6NGC4 264 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 EBLN1P0CF75 366 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 FGF5P12034 268 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 POLR2CP19387 275 aaPredicted RBP21.19■□□□□ 0.98
LIME1-203ENST00000465591 MAP4P27816 1152 aaKnown RBP21.19■□□□□ 0.98
LIME1-203ENST00000465591 SESN2P58004 480 aaPredicted RBP21.19■□□□□ 0.98
LIME1-203ENST00000465591 BASP1P80723 227 aaKnown RBP21.19■□□□□ 0.98
LIME1-203ENST00000465591 KRT33BQ14525 404 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 IL11RAQ14626 422 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 BRD3Q15059 726 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 TBR1Q16650 682 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 ZSCAN1Q8NBB4 408 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 ACVR1CQ8NER5 493 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 MAIP1Q8WWC4 291 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 CHRAC1Q9NRG0 131 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 HEBP2Q9Y5Z4 205 aa21.19■□□□□ 0.98
LIME1-203ENST00000465591 GCN1Q92616 2671 aaKnown RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 KIAA0754O94854 1291 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 F8A1P23610 371 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 NDUFS1P28331 727 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 CD151P48509 253 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 C19orf57Q0VDD7 668 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 RPA4Q13156 261 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 BOP1Q14137 746 aaKnown RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 TRIP13Q15645 432 aaPredicted RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 TTC27Q6P3X3 843 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 GSTA5Q7RTV2 222 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 LDB1Q86U70 411 aaPredicted RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 SIDT2Q8NBJ9 832 aaKnown RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 GALNT6Q8NCL4 622 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 OR52E1Q8NGJ3 308 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 OR6P1Q8NGX9 317 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 OR4L1Q8NH43 312 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 ELMO1Q92556 727 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 MS4A14Q96JA4 679 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 CD180Q99467 661 aa21.18■□□□□ 0.98
LIME1-203ENST00000465591 GPN2Q9H9Y4 310 aaPredicted RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 MARCH4Q9P2E8 410 aaPredicted RBP21.18■□□□□ 0.98
LIME1-203ENST00000465591 SPTA1P02549 2419 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 UBA6A0AVT1 1052 aaPredicted RBP21.17■□□□□ 0.98
LIME1-203ENST00000465591 IFRD1O00458 451 aaPredicted RBP21.17■□□□□ 0.98
LIME1-203ENST00000465591 BTN3A3O00478 584 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 SPAG6O75602 509 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 ITGB2P05107 769 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 STAT5AP42229 794 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 ABHD18Q0P651 414 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 PRKG2Q13237 762 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 TUBB3Q13509 450 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 LAMB3Q13751 1172 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 PCID2Q5JVF3 399 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 RASGRP3Q8IV61 690 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 REXO1L1PQ8IX06 675 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 PPHLN1Q8NEY8 458 aaKnown RBP21.17■□□□□ 0.98
LIME1-203ENST00000465591 LKAAEAR1Q8TD35 194 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 LCN9Q8WX39 176 aa21.17■□□□□ 0.98
LIME1-203ENST00000465591 TFGQ92734 400 aaPredicted RBP21.17■□□□□ 0.98
LIME1-203ENST00000465591 MED8Q96G25 268 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms