RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 LEPRP48357 1165 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 GUCY2DQ02846 1103 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 ZFP36L1Q07352 338 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 BOP1Q14137 746 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 PTRHD1Q6GMV3 140 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 DUS1LQ6P1R4 473 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 TRMT10BQ6PF06 316 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 NAPRTQ6XQN6 538 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 GALNT7Q86SF2 657 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 SLITRK4Q8IW52 837 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 KRT222Q8N1A0 295 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 ZFPM2Q8WW38 1151 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 GATA6Q92908 595 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 GRAMD1AQ96CP6 724 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 PANX3Q96QZ0 392 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 TBC1D10AQ9BXI6 508 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 EPB41L1Q9H4G0 881 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 FBXO6Q9NRD1 293 aaPredicted RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 IMP3Q9NV31 184 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 MOCS1Q9NZB8 636 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 CRYL1Q9Y2S2 319 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 ENTPD2Q9Y5L3 495 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 CFAP20Q9Y6A4 193 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 F7P08709 466 aaPredicted RBP19.84■□□□□ 0.77
SKA3-205ENST00000465471 PKMP14618 531 aaKnown RBP19.84■□□□□ 0.77
SKA3-205ENST00000465471 ITGB6P18564 788 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 ACADLP28330 430 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 FMO4P31512 558 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 CCKBRP32239 447 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 MPP1Q00013 466 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 GBX1Q14549 363 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 AMZ1Q400G9 498 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 ZNF549Q6P9A3 640 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 KIAA0408Q6ZU52 694 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 B3GNT8Q7Z7M8 397 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 SLC22A15Q8IZD6 547 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 OR10G6Q8NH81 332 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 GSDMBQ8TAX9 411 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 NUDT22Q9BRQ3 303 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 FAM129AQ9BZQ8 928 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 KIR3DX1Q9H7L2 352 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 SYNDIG1Q9H7V2 258 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 SAYSD1Q9NPB0 183 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 LATS2Q9NRM7 1088 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 FAM114A2Q9NRY5 505 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 OGFRQ9NZT2 677 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 MED16Q9Y2X0 877 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 HEBP2Q9Y5Z4 205 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 CHD8Q9HCK8 2581 aa19.84■□□□□ 0.77
SKA3-205ENST00000465471 DUX1O43812 170 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 NIPSNAP2O75323 286 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 SLCO2B1O94956 709 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 GABRB3P28472 473 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 SYTL3Q4VX76 610 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 TEDDM1Q5T9Z0 273 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 NKAIN2Q5VXU1 208 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 ZNF449Q6P9G9 518 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 WDR74Q6RFH5 385 aaPredicted RBP19.83■□□□□ 0.77
SKA3-205ENST00000465471 ZNF574Q6ZN55 896 aaPredicted RBP19.83■□□□□ 0.77
SKA3-205ENST00000465471 PIM3Q86V86 326 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 VRK3Q8IV63 474 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 GABPB2Q8TAK5 448 aaPredicted RBP19.83■□□□□ 0.77
SKA3-205ENST00000465471 PYROXD1Q8WU10 500 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 ASZ1Q8WWH4 475 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 TMEM159Q96B96 161 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 DPYSL5Q9BPU6 564 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 RDH14Q9HBH5 336 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 PDP2Q9P2J9 529 aa19.83■□□□□ 0.77
SKA3-205ENST00000465471 WDFY3Q8IZQ1 3526 aa19.83■□□□□ 0.76
SKA3-205ENST00000465471 FRYQ5TBA9 3013 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 IFRD1O00458 451 aaPredicted RBP19.82■□□□□ 0.76
SKA3-205ENST00000465471 KPNA5O15131 536 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 HAUS5O94927 633 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 APOA4P06727 396 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 NDUFS1P28331 727 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 BRD3Q15059 726 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 MAP9Q49MG5 647 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 PLEKHS1Q5SXH7 462 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 OR4D9Q8NGE8 314 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 TFGQ92734 400 aaPredicted RBP19.82■□□□□ 0.76
SKA3-205ENST00000465471 LIN37Q96GY3 246 aaPredicted RBP19.82■□□□□ 0.76
SKA3-205ENST00000465471 TMEM74Q96NL1 305 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 MVB12BQ9H7P6 319 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 SLC17A6Q9P2U8 582 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 SLC24A2Q9UI40 661 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 COMMD10Q9Y6G5 202 aa19.82■□□□□ 0.76
SKA3-205ENST00000465471 MN1Q10571 1320 aaPredicted RBP19.81■□□□□ 0.76
SKA3-205ENST00000465471 KIF26BQ2KJY2 2108 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 UBXN7O94888 489 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 HOXB3P14651 431 aaPredicted RBP19.81■□□□□ 0.76
SKA3-205ENST00000465471 ECHS1P30084 290 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 CAPZBP47756 277 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 CARSP49589 748 aaKnown RBP19.81■□□□□ 0.76
SKA3-205ENST00000465471 CLCN7P51798 805 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 LIMK2P53671 638 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 INHBCP55103 352 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 HSPA14Q0VDF9 509 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 TMED2Q15363 201 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 TMEM71Q6P5X7 295 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 CNSTQ6PJW8 725 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms