RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 YIPF1Q9Y548 306 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 KLHL33A6NCF5 533 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 K7ERQ8 282 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 GSTA4O15217 222 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 GGT1P19440 569 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 HOXD10P28358 340 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 TTKP33981 857 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 GDF5P43026 501 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 NUP107P57740 925 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 PTGR1Q14914 329 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 PLCL1Q15111 1095 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 CRY1Q16526 586 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 IMPG1Q17R60 797 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 CLEC4FQ8N1N0 589 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 OR2T12Q8NG77 320 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 GAB3Q8WWW8 586 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 FIG4Q92562 907 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 CLSTN3Q9BQT9 956 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 THUMPD3Q9BV44 507 aaKnown RBP18■□□□□ 0.47
SYNE4-204ENST00000465425 LATS2Q9NRM7 1088 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 ELOVL2Q9NXB9 296 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 KLQ9UEF7 1012 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18■□□□□ 0.47
SYNE4-204ENST00000465425 CRLS1Q9UJA2 301 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 H0YAE9 185 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF701M0R085 212 aaPredicted RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 TAPBPO15533 448 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ULK1O75385 1050 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 PCNAP12004 261 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 PIK3CGP48736 1102 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 MAPKAPK3Q16644 382 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 CACHD1Q5VU97 1274 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 RIMKLAQ8IXN7 391 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ZBTB2Q8N680 514 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 DCAF4L2Q8NA75 395 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 LKAAEAR1Q8TD35 194 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 GFM2Q969S9 779 aaKnown RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 TRMT2BQ96GJ1 504 aaKnown RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 C2orf49Q9BVC5 232 aaPredicted RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 NPLQ9BXD5 320 aaPredicted RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 CD244Q9BZW8 370 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 DPY30Q9C005 99 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 VAPAQ9P0L0 249 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 EBF1Q9UH73 591 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 EVLQ9UI08 416 aaPredicted RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
SYNE4-204ENST00000465425 SLC28A1O00337 649 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ACRV1P26436 265 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ARSFP54793 590 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 PHKG1Q16816 387 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 FAM174BQ3ZCQ3 159 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 LHX8Q68G74 356 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 SULT1C3Q6IMI6 304 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 RETSATQ6NUM9 610 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 TBPL2Q6SJ96 375 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 SDCCAG3Q96C92 435 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 UGT2B28Q9BY64 529 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 CXorf21Q9HAI6 301 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 ZFP14Q9HCL3 533 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 IL26Q9NPH9 171 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 OR51B4Q9Y5P0 310 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 PRSS21Q9Y6M0 314 aa17.99■□□□□ 0.47
SYNE4-204ENST00000465425 GLYATL1P3A0A0U1RQE8 302 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 GAPDHSO14556 408 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 DFNA5O60443 496 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 CLDN7O95471 211 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 TRBC1P01850 177 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 UGT1A1P22309 533 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 UGT1A4P22310 534 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 UGT1A3P35503 534 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 UGT1A5P35504 534 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 PPP3CCP48454 512 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 ALDH3A2P51648 485 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 LYPLAL1Q5VWZ2 237 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 GPR180Q86V85 440 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 CRIPAKQ8N1N5 446 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 WFDC5Q8TCV5 224 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 TMBIM1Q969X1 311 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF583Q96ND8 569 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 YTHDF1Q9BYJ9 559 aaKnown RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 CCL27Q9Y4X3 112 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 LATS1O95835 1130 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 MTHFRP42898 656 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 GNPDA1P46926 289 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 ADARB1P78563 741 aaKnown RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 HMGCS1Q01581 520 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 PLA2G4EQ3MJ16 856 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 ZIK1Q3SY52 487 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 SGO1Q5FBB7 561 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 CCNYL2Q5T2Q4 361 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 USP51Q70EK9 711 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 GLB1L3Q8NCI6 653 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 OR10A6Q8NH74 314 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 FAM81AQ8TBF8 368 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 C12orf43Q96C57 262 aaKnown RBP17.98■□□□□ 0.47
SYNE4-204ENST00000465425 PHF12Q96QT6 1004 aa17.98■□□□□ 0.47
SYNE4-204ENST00000465425 POLR1BQ9H9Y6 1135 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms