RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 SCYL1Q96KG9 808 aa12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 APOBEC3BQ9UH17 382 aaKnown RBP12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 SMG5Q9UPR3 1016 aaKnown RBP12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 CACNA1HO95180 2353 aa12.51□□□□□ -0.41
SUPT20H-204ENST00000464572 PRPF4O43172 522 aaKnown RBP eCLIP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 KCNJ13O60928 360 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 CFIP05156 583 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 TFEBP19484 476 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 IRX4P78413 519 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ABRQ12979 859 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ISCA2Q86U28 154 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 PTERQ96BW5 349 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ALG9Q9H6U8 611 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 PLLPQ9Y342 182 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 SNX11Q9Y5W9 270 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 FANCMQ8IYD8 2048 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 EIF3FO00303 357 aaPredicted RBP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 CDC7O00311 574 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 BTN3A1O00481 513 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC34A2O95436 690 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 NR1D1P20393 614 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ACTR1BP42025 376 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ACTR1AP61163 376 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ATP6V0D1P61421 351 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ILF3Q12906 894 aaKnown RBP eCLIP12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 RPA4Q13156 261 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 C1orf61Q13536 156 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ACAP2Q15057 778 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 LRRC8EQ6NSJ5 796 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ANKRD42Q8N9B4 389 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 FAM111AQ96PZ2 611 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 OR52A5Q9H2C5 316 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 DPEP2Q9H4A9 486 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 ACSL5Q9ULC5 683 aa12.5□□□□□ -0.41
SUPT20H-204ENST00000464572 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 NPEPPSL1A6NEC2 478 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 PRR19A6NJB7 356 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 PATE3B3GLJ2 98 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 SNX2O60749 519 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 CELA2BP08218 269 aaPredicted RBP12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 IDSP22304 550 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 OAS2P29728 719 aaKnown RBP12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 HOXD12P35452 270 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 CTSKP43235 329 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 CLCNKAP51800 687 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 BNC1Q01954 994 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 TSNQ15631 228 aaKnown RBP12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 DUOXA1Q1HG43 343 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 NRROSQ86YC3 692 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 FSCN3Q9NQT6 498 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 CPSF2Q9P2I0 782 aaKnown RBP12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 EMCNQ9ULC0 261 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 RAB23Q9ULC3 237 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 MPC1LP0DKB6 136 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 DPP6P42658 865 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 KCNC1P48547 511 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 TCF15Q12870 199 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 MDM1Q8TC05 714 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 GPBAR1Q8TDU6 330 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 KIAA1191Q96A73 305 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 XPR1Q9UBH6 696 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
SUPT20H-204ENST00000464572 FRYLO94915 3013 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PDZK1P1A8MUH7 402 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TK2O00142 265 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PLIN3O60664 434 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 KPNA2P52292 529 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 HNRNPKP61978 463 aaKnown RBP eCLIP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 OR4D1Q15615 310 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TAF8Q7Z7C8 310 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 CCDC63Q8NA47 563 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 CEP76Q8TAP6 659 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 MGARPQ8TDB4 240 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 GSDMCQ9BYG8 508 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 WWP1Q9H0M0 922 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ARRDC1-AS1Q9H2J1 176 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TFB2MQ9H5Q4 396 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 FAM53CQ9NYF3 392 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TBC1D29Q9UFV1 150 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ADAMTS6Q9UKP5 1117 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ZFC3H1O60293 1989 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms