RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FCRL4Q96PJ5 515 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TMEM121Q9BTD3 319 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 FGF21Q9NSA1 209 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 HEBP2Q9Y5Z4 205 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TRBV5-4A0A0C4DH59 114 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 H7C0S8 307 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 PSMD3O43242 534 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 MT-ND3P03897 115 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 POLR2CP19387 275 aaPredicted RBP18.37■□□□□ 0.53
SF3A1-205ENST00000463818 CDC25BP30305 580 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 ARCN1P48444 511 aaKnown RBP18.37■□□□□ 0.53
SF3A1-205ENST00000463818 HSD11B2P80365 405 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 SEPT6Q14141 434 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 POU6F1Q14863 301 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 D2HGDHQ8N465 521 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 SPC24Q8NBT2 197 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 CDKN2AIPNLQ96HQ2 116 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 FERD3LQ96RJ6 166 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 CLMPQ9H6B4 373 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 LHX9Q9NQ69 397 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 PIH1D1Q9NWS0 290 aaKnown RBP18.37■□□□□ 0.53
SF3A1-205ENST00000463818 KCND3Q9UK17 655 aa18.37■□□□□ 0.53
SF3A1-205ENST00000463818 FLNBO75369 2602 aaKnown RBP18.36■□□□□ 0.53
SF3A1-205ENST00000463818 IGLV3-16A0A075B6K0 115 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 NTRK1P04629 796 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 ACRV1P26436 265 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 KPNA2P52292 529 aaKnown RBP18.36■□□□□ 0.53
SF3A1-205ENST00000463818 ERV3-1Q14264 604 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 FBXO38Q6PIJ6 1188 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 PHC3Q8NDX5 983 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 STYXQ8WUJ0 223 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 PPM1MQ96MI6 270 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 ALS2CR12Q96Q35 445 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 OR52A5Q9H2C5 316 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 COG4Q9H9E3 785 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 AKIRIN1Q9H9L7 192 aaPredicted RBP18.36■□□□□ 0.53
SF3A1-205ENST00000463818 ZNF71Q9NQZ8 489 aaPredicted RBP18.36■□□□□ 0.53
SF3A1-205ENST00000463818 IMPACTQ9P2X3 320 aa18.36■□□□□ 0.53
SF3A1-205ENST00000463818 ZBTB11O95625 1053 aaPredicted RBP18.35■□□□□ 0.53
SF3A1-205ENST00000463818 AP2A1O95782 977 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 PDHA2P29803 388 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 CACNG1Q06432 222 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 PRKAA1Q13131 559 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 DNASE1L3Q13609 305 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 GPR19Q15760 415 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 P3H1Q32P28 736 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 ZNF658BQ4V348 819 aaPredicted RBP18.35■□□□□ 0.53
SF3A1-205ENST00000463818 PIANPQ8IYJ0 282 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 RNF10Q8N5U6 811 aaKnown RBP18.35■□□□□ 0.53
SF3A1-205ENST00000463818 CLDN19Q8N6F1 224 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 ACVR1CQ8NER5 493 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 C9orf43Q8TAL5 461 aaPredicted RBP18.35■□□□□ 0.53
SF3A1-205ENST00000463818 CT55Q8WUE5 264 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 LCN9Q8WX39 176 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 ABHD17AQ96GS6 310 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
SF3A1-205ENST00000463818 PIPSLA2A3N6 862 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CCDC78A2IDD5 438 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 IFRD1O00458 451 aaPredicted RBP18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CREG1O75629 220 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 FURINP09958 794 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CD151P48509 253 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CSRP3P50461 194 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 TUBB4BP68371 445 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 TUBB2AQ13885 445 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 DBN1Q16643 649 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 TMTC4Q5T4D3 741 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 ZNF449Q6P9G9 518 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 FAM199XQ6PEV8 388 aaPredicted RBP18.34■□□□□ 0.53
SF3A1-205ENST00000463818 LINC00523Q86TU6 105 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CARFQ8N187 725 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 OR52K1Q8NGK4 314 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 ATG4AQ8WYN0 398 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 NRTNQ99748 197 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 TUBB2BQ9BVA1 445 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 SRMSQ9H3Y6 488 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 VPS37BQ9H9H4 285 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 SMARCAL1Q9NZC9 954 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 PCDHGA6Q9Y5G7 932 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 KCNMB2Q9Y691 235 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CAPN6Q9Y6Q1 641 aa18.34■□□□□ 0.53
SF3A1-205ENST00000463818 CDC14CA4D256 554 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 MROH6A6NGR9 719 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 SLC9B1P1A6NJY1 282 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 CDH3P22223 829 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 PSMA3P25788 255 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 PREPP48147 710 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 RPA4Q13156 261 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 SKIDA1Q1XH10 827 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 TMEM135Q86UB9 458 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 OR8K5Q8NH50 307 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 TFGQ92734 400 aaPredicted RBP18.33■□□□□ 0.52
SF3A1-205ENST00000463818 ZNF501Q96CX3 271 aaPredicted RBP18.33■□□□□ 0.52
SF3A1-205ENST00000463818 TWSG1Q9GZX9 223 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 MVB12BQ9H7P6 319 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 C1GALT1Q9NS00 363 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 SOHLH2Q9NX45 425 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms