RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ELK3P41970 407 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 WHAMMP3Q1A5X7 153 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 BBS9Q3SYG4 887 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 DNAJC21Q5F1R6 531 aaKnown RBP17.26■□□□□ 0.35
VPS52-214ENST00000463486 STEAP4Q687X5 459 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 ARHGAP22Q7Z5H3 698 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 SDCCAG8Q86SQ7 713 aaPredicted RBP17.26■□□□□ 0.35
VPS52-214ENST00000463486 PDZD3Q86UT5 571 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 LRRC6Q86X45 466 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 VRK3Q8IV63 474 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 DENND6AQ8IWF6 608 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 KRT222Q8N1A0 295 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 WDR36Q8NI36 951 aaKnown RBP17.26■□□□□ 0.35
VPS52-214ENST00000463486 JPH3Q8WXH2 748 aaPredicted RBP17.26■□□□□ 0.35
VPS52-214ENST00000463486 NCSTNQ92542 709 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 ELMO1Q92556 727 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 RSC1A1Q92681 617 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 NRTNQ99748 197 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 DPYSL5Q9BPU6 564 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 NAT9Q9BTE0 207 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 CCDC86Q9H6F5 360 aaKnown RBP17.26■□□□□ 0.35
VPS52-214ENST00000463486 KIR3DX1Q9H7L2 352 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 SLC24A2Q9UI40 661 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 MED16Q9Y2X0 877 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 MN1Q10571 1320 aaPredicted RBP17.25■□□□□ 0.35
VPS52-214ENST00000463486 DUX1O43812 170 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 UBXN7O94888 489 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 TPBGLP0DKB5 382 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 TYRP1P17643 537 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 ITGB6P18564 788 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 GABREP78334 506 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 CTBP1Q13363 440 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 BOP1Q14137 746 aaKnown RBP17.25■□□□□ 0.35
VPS52-214ENST00000463486 FASTKD3Q14CZ7 662 aaKnown RBP17.25■□□□□ 0.35
VPS52-214ENST00000463486 HIF1AQ16665 826 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 C3orf38Q5JPI3 329 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 HP1BP3Q5SSJ5 553 aaPredicted RBP17.25■□□□□ 0.35
VPS52-214ENST00000463486 ZNF470Q6ECI4 717 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 ZNF549Q6P9A3 640 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 UNC5AQ6ZN44 842 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 RAB11FIP2Q7L804 512 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 PROSER1Q86XN7 944 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 SLC22A15Q8IZD6 547 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
VPS52-214ENST00000463486 RCBTB1Q8NDN9 531 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 PHC3Q8NDX5 983 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 ZNF592Q92610 1267 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 LRRC39Q96DD0 335 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 CCDC74BQ96LY2 380 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 SLC46A1Q96NT5 459 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 RAB33BQ9H082 229 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 DPH5Q9H2P9 285 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 C20orf96Q9NUD7 363 aaPredicted RBP17.25■□□□□ 0.35
VPS52-214ENST00000463486 GALPQ9UBC7 116 aa17.25■□□□□ 0.35
VPS52-214ENST00000463486 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 PLD2O14939 933 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 TLX3O43711 291 aaPredicted RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 SLCO2B1O94956 709 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 TTC4O95801 387 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 HGFP14210 728 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 GABRB3P28472 473 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 FMO4P31512 558 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 SLC1A2P43004 574 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 CAPZBP47756 277 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 GFERP55789 205 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 EIF3BP55884 814 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 CKAP4Q07065 602 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 EIF3IQ13347 325 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 TRA2AQ13595 282 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS52-214ENST00000463486 GBX1Q14549 363 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 BRD3Q15059 726 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 HSP90AA5PQ58FG0 334 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 SPANXN3Q5MJ09 141 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 PHF19Q5T6S3 580 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 RNF187Q5TA31 235 aaPredicted RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 ZDHHC24Q6UX98 284 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 ZCCHC14Q8WYQ9 949 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 SEC14L1Q92503 715 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 TFGQ92734 400 aaPredicted RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 ART4Q93070 314 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 TRIM44Q96DX7 344 aaPredicted RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 AHCYL2Q96HN2 611 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 STRADBQ9C0K7 418 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 TWSG1Q9GZX9 223 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 LATS2Q9NRM7 1088 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 INTS10Q9NVR2 710 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 EPHA6Q9UF33 1036 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 CRYL1Q9Y2S2 319 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 AK5Q9Y6K8 562 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 URB1O60287 2271 aaKnown RBP17.24■□□□□ 0.35
VPS52-214ENST00000463486 CFAP47Q6ZTR5 3102 aa17.24■□□□□ 0.35
VPS52-214ENST00000463486 AHCTF1Q8WYP5 2266 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 UBA6A0AVT1 1052 aaPredicted RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 CDRT15L2A8MXV6 281 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 HGSO14964 777 aaPredicted RBP17.23■□□□□ 0.35
VPS52-214ENST00000463486 ESR1P03372 595 aa17.23■□□□□ 0.35
VPS52-214ENST00000463486 ERVK-10P10266 1014 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms