RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MLKLQ8NB16 471 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 CLEC1AQ8NC01 280 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 ACBD4Q8NC06 268 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 LPCAT1Q8NF37 534 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 FAM71BQ8TC56 605 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 COG1Q8WTW3 980 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TM9SF4Q92544 642 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 FER1L6-AS2Q96M78 137 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TRAPPC9Q96Q05 1148 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 VPS35Q96QK1 796 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TRIB3Q96RU7 358 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 AGPAT1Q99943 283 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 SPATA16Q9BXB7 569 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TLR10Q9BXR5 811 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 ACTR5Q9H9F9 607 aaPredicted RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 GPAMQ9HCL2 828 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 NLRC4Q9NPP4 1024 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 SAMSN1Q9NSI8 373 aaKnown RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 POMT2Q9UKY4 750 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 GTF3C1Q12789 2109 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 HCFC1P51610 2035 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 UBA6A0AVT1 1052 aaPredicted RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 H3BRJ5 948 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PCDH17O14917 1159 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 MATN3O15232 486 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 MFSD11O43934 449 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 KLHL41O60662 606 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 KCNJ13O60928 360 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 UMODP07911 640 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 MTHFD1P11586 935 aaKnown RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 EEF1GP26641 437 aaKnown RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 OTX2P32243 289 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 SERPINB6P35237 376 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PCK1P35558 622 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 FOXL2P58012 376 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 HIF1AQ16665 826 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 KYNUQ16719 465 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 SMTNL2Q2TAL5 461 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 ALS2CLQ60I27 953 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 TXNRD3NBQ6F5E7 133 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 RPUSD3Q6P087 351 aaKnown RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 OOSP2Q86WS3 158 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 NXPE1Q8N323 547 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
SMC3-202ENST00000462899 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 NSMCE1Q8WV22 266 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 CLIP3Q96DZ5 547 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 CCDC120Q96HB5 630 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PITPNM3Q9BZ71 974 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 ZFYVE1Q9HBF4 777 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 SYTL2Q9HCH5 934 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PCDH18Q9HCL0 1135 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 CHST11Q9NPF2 352 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 TIMMDC1Q9NPL8 285 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 C1GALT1Q9NS00 363 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PARVAQ9NVD7 372 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 HRASLS2Q9NWW9 162 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 P4HTMQ9NXG6 502 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 TRIM10Q9UDY6 481 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 PADI2Q9Y2J8 665 aa7.48□□□□□ -1.21
SMC3-202ENST00000462899 A6NJY4 79 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 TMEM150CB9EJG8 249 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 DDX3YO15523 660 aaKnown RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 PRICKLE3O43900 615 aaPredicted RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 RNF8O76064 485 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 CDK14O94921 469 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 IGHEP01854 428 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 RARAP10276 462 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 DESP17661 470 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 HTR1EP28566 365 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ARL4AP40617 200 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 HALP42357 657 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 GABRA4P48169 554 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ARL4DP49703 201 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 CTSCP53634 463 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 SLC25A11Q02978 314 aaKnown RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 TMEM115Q12893 351 aaPredicted RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 NFE2L1Q14494 772 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ZNF169Q14929 603 aaPredicted RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 PAFAH1B3Q15102 231 aaKnown RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 CAMK4Q16566 473 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 DPCR1Q3MIW9 517 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ATP13A5Q4VNC0 1218 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 TMTC4Q5T4D3 741 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 NCBP2-AS2Q69YL0 99 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 FCRL6Q6DN72 434 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 RHBDD2Q6NTF9 364 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 RIPOR1Q6ZS17 1223 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 CCHCR1Q8TD31 782 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 DTX3LQ8TDB6 740 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ZFPM2Q8WW38 1151 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 TADA1Q96BN2 335 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 C14orf79Q96F83 325 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 TSGA13Q96PP4 275 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 GBP5Q96PP8 586 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 TREX2Q9BQ50 279 aaPredicted RBP7.47□□□□□ -1.21
SMC3-202ENST00000462899 KIR3DX1Q9H7L2 352 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 FANCEQ9HB96 536 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms