RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 WASHC5Q12768 1159 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 POLD3Q15054 466 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 SLC5A9Q2M3M2 681 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PARP6Q2NL67 630 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 TEX44Q53QW1 395 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ANKRD22Q5VYY1 191 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PID1Q7Z2X4 250 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 MTERF4Q7Z6M4 381 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 HOOK3Q86VS8 718 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 CMTM8Q8IZV2 173 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF567Q8N184 647 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ZCCHC9Q8N567 271 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ATPAF2Q8N5M1 289 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 C12orf76Q8N812 135 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 NAT8LQ8N9F0 302 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 LRTOMTQ8WZ04 291 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 SMG7Q92540 1137 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PRCCQ92733 491 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PPP2R3CQ969Q6 453 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 MRPL38Q96DV4 380 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PKNOX2Q96KN3 472 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 SPATA13Q96N96 652 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 VAT1Q99536 393 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 TRIM54Q9BYV2 358 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 TXLNGYQ9BZA5 131 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 VIPAS39Q9H9C1 493 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 UNKLQ9H9P5 680 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 GALNT9Q9HCQ5 603 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF212Q9UDV6 495 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 IPO11Q9UI26 975 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 HPCAL4Q9UM19 191 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ARHGAP26Q9UNA1 814 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 SHOC2Q9UQ13 582 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 MED16Q9Y2X0 877 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 TCRBV7S3A2A0A539 114 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 GOLGA8MH3BSY2 632 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CHADO15335 359 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 RAMP2O60895 175 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 TBL1XO60907 577 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 JCHAINP01591 159 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 HRGP04196 525 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 GRPP07492 148 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PIM1P11309 404 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CCNB1P14635 433 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 MAKP20794 623 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 FDXRP22570 491 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 HSD17B3P37058 310 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 MAGEA6P43360 314 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 SGSHP51688 502 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PMS2P54278 862 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 ARL4CP56559 192 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 ZBTB17Q13105 803 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF177Q13360 481 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 KCNC3Q14003 757 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 KCNJ11Q14654 390 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PARP15Q460N3 678 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 SPDYCQ5MJ68 293 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 LY6G5CQ5SRR4 150 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CFAP58Q5T655 872 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 FAXCQ5TGI0 409 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 ALS2CLQ60I27 953 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 TRMT10CQ7L0Y3 403 aaKnown RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CHST9Q7L1S5 443 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PPP1R32Q7Z5V6 425 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CLNKQ7Z7G1 428 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 GPR149Q86SP6 731 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF354CQ86Y25 554 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 FAM217AQ8IXS0 508 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PSD4Q8NDX1 1056 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 VN1R2Q8NFZ6 395 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 POC1BQ8TC44 478 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 UBLCP1Q8WVY7 318 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 EXOC4Q96A65 974 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 TMA16Q96EY4 203 aaKnown RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 HMCESQ96FZ2 354 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PRICKLE1Q96MT3 831 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 APOL5Q9BWW9 433 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 MAGEH1Q9H213 219 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 SERHL2Q9H4I8 314 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 SFXN1Q9H9B4 322 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 TMEM74BQ9NUR3 256 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 DNAJC17Q9NVM6 304 aaKnown RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 KLHL8Q9P2G9 620 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-204ENST00000462658 IGSF9Q9P2J2 1179 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 CPNE7Q9UBL6 633 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 C5orf42Q9H799 3197 aa7.37□□□□□ -1.23
UBE4B-204ENST00000462658 PRAMEF33A0A0G2JMD5 474 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 A0A1B0GVM2 712 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 A0A1W2PS29 197 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 ILVBLA1L0T0 632 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 TYW5A2RUC4 315 aaKnown RBP7.36□□□□□ -1.23
UBE4B-204ENST00000462658 E7EVH7 732 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 F5H423 210 aaPredicted RBP7.36□□□□□ -1.23
UBE4B-204ENST00000462658 J3KR12 359 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 ALOX15BO15296 676 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 EIF3HO15372 352 aaKnown RBP eCLIP7.36□□□□□ -1.23
UBE4B-204ENST00000462658 PRAMEF10O60809 474 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 NEBLO76041 1014 aa7.36□□□□□ -1.23
UBE4B-204ENST00000462658 TMEM63AO94886 807 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms