RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TCAF1Q9Y4C2 921 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 TMEM184BQ9Y519 407 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 COLEC10Q9Y6Z7 277 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 PIEZO2Q9H5I5 2752 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 COL6A6A6NMZ7 2263 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 IGHV5-51A0A0C4DH38 117 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 GOT2P00505 430 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 FTH1P02794 183 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ITGB2P05107 769 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 NELFEP18615 380 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ADRA1DP25100 572 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 MAP4P27816 1152 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 RPL22P35268 128 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ARCN1P48444 511 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 CYP4F2P78329 520 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ACVR1Q04771 509 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 C19orf57Q0VDD7 668 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 RPA4Q13156 261 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 TUBB3Q13509 450 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 BOP1Q14137 746 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 MAP7Q14244 749 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 IL11RAQ14626 422 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SYTL3Q4VX76 610 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ARMC6Q6NXE6 501 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF449Q6P9G9 518 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 NLRP9Q7RTR0 991 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 TIPARPQ7Z3E1 657 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 RASGRP3Q8IV61 690 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF843Q8N446 348 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ESX1Q8N693 406 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SIDT2Q8NBJ9 832 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ACVR1CQ8NER5 493 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ELMO1Q92556 727 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 EXTL1Q92935 676 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 PEX13Q92968 403 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 HDAC10Q969S8 669 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 RNF31Q96EP0 1072 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ELMO2Q96JJ3 720 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SLC41A2Q96JW4 573 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF778Q96MU6 729 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 MAP3K3Q99759 626 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 HGH1Q9BTY7 390 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SPRY4Q9C004 299 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SEMA4CQ9C0C4 833 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 TRIT1Q9H3H1 467 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 GPN2Q9H9Y4 310 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 HRASLS2Q9NWW9 162 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 SEMA5BQ9P283 1151 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 RIMKLBQ9ULI2 386 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 PRSS21Q9Y6M0 314 aa9.91□□□□□ -0.82
SF3A3-204ENST00000462258 GCN1Q92616 2671 aaKnown RBP9.91□□□□□ -0.82
SF3A3-204ENST00000462258 LOC101059948A0A1B0GTJ6 334 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 UBA6A0AVT1 1052 aaPredicted RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 OR6C74A6NCV1 312 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF891A8MT65 544 aaPredicted RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 MATN2O00339 956 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 LIN7AO14910 233 aaPredicted RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 KIAA0754O94854 1291 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 EBLN1P0CF75 366 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 FGF5P12034 268 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF28P17035 718 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PDHA2P29803 388 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 STAT5AP42229 794 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 KCNJ1P48048 391 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 CD151P48509 253 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ARL4DP49703 201 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 KPNA2P52292 529 aaKnown RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 SESN2P58004 480 aaPredicted RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PRAMEP78395 509 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ABHD18Q0P651 414 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PRKAA1Q13131 559 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 KCNAB1Q14722 419 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 FASTKD1Q53R41 847 aaKnown RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 AARS2Q5JTZ9 985 aaKnown RBP9.9□□□□□ -0.82
SF3A3-204ENST00000462258 LYPLAL1Q5VWZ2 237 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 C4orf22Q6V702 233 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF534Q76KX8 674 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PPP1R3BQ86XI6 285 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 KMT5CQ86Y97 462 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 UNC5BQ8IZJ1 945 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PRELID2Q8N945 189 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 OR6P1Q8NGX9 317 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 OR4L1Q8NH43 312 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 LCN9Q8WX39 176 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 STAMBPL1Q96FJ0 436 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 MED8Q96G25 268 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 FERD3LQ96RJ6 166 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 TTC1Q99614 292 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 ARHGAP9Q9BRR9 750 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 EFHD1Q9BUP0 239 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 SLC12A9Q9BXP2 914 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 SRMSQ9H3Y6 488 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 GRPEL1Q9HAV7 217 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 PDE7BQ9NP56 450 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 SOHLH2Q9NX45 425 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 LNPEPQ9UIQ6 1025 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 POMT2Q9UKY4 750 aa9.9□□□□□ -0.82
SF3A3-204ENST00000462258 DRG1Q9Y295 367 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms