RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 AQP12AQ8IXF9 295 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 TMCO5AQ8N6Q1 288 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 RORBQ92753 470 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 KLHL32Q96NJ5 620 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 GORASP1Q9BQQ3 440 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 LRRC3Q9BY71 257 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SMG9Q9H0W8 520 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 REEP1Q9H902 201 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 PADI4Q9UM07 663 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 PCDH8O95206 1070 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 LAG3P18627 525 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 FDXRP22570 491 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 RGRP47804 291 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 IDH2P48735 452 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 MERTKQ12866 999 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 CHIT1Q13231 466 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 PTPRRQ15256 657 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 C6orf136Q5SQH8 315 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 CHSY3Q70JA7 882 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SNX20Q7Z614 316 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SLC15A3Q8IY34 581 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 C2orf73Q8N5S3 287 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 MAGED4Q96JG8 741 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 C3orf30Q96M34 536 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 RANBP9Q96S59 729 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 RERGLQ9H628 205 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 LIN28AQ9H9Z2 209 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 K7EPI3 171 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 FAM20BO75063 409 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 EFCAB14O75071 495 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 HNF4AP41235 474 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 KIR3DL1P43629 444 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 RPL34P49207 117 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 TCEA2Q15560 299 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 KCTD21Q4G0X4 260 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SULT1C3Q6IMI6 304 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 HID1Q8IV36 788 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 PIANPQ8IYJ0 282 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 AHI1Q8N157 1196 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 ZNF366Q8N895 744 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 TRPV3Q8NET8 790 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 ARRDC2Q8TBH0 407 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 ZNF483Q8TF39 744 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 MTERF1Q99551 399 aaKnown RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 SOX17Q9H6I2 414 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-204ENST00000460696 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
NPHP4-204ENST00000460696 LOC730098B7Z3J9 87 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 NOBOXO60393 691 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 C8AP07357 584 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ALOX15P16050 662 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 PRDX3P30048 256 aaKnown RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 NSG1P42857 185 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ACADVLP49748 655 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 PWP1Q13610 501 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 PTGR1Q14914 329 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 BROXQ5VW32 411 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 LHX8Q68G74 356 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 PGM2L1Q6PCE3 622 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 KCNJ9Q92806 393 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 GATA6Q92908 595 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ITCHQ96J02 903 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 CGREF1Q99674 301 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 FAM83DQ9H4H8 585 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ACTR3BQ9P1U1 418 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 SAMHD1Q9Y3Z3 626 aaKnown RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 SPTA1P02549 2419 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 IFNA8P32881 189 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ADRA1AP35348 466 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 HSF5Q4G112 596 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 FNDC3BQ53EP0 1204 aaKnown RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ATAT1Q5SQI0 421 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 Q7L0L9 218 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 TAS1R1Q7RTX1 841 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 GOLGA7Q7Z5G4 137 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 AADATQ8N5Z0 425 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 DNAJC5GQ8N7S2 189 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 RHEBL1Q8TAI7 183 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ASZ1Q8WWH4 475 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 DYTNA2CJ06 578 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 AGRPO00253 132 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 MUSKO15146 869 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 THRBP10828 461 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 CAPN3P20807 821 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ATP6V1E1P36543 226 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 C18orf21Q32NC0 220 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-204ENST00000460696 RAET1GQ6H3X3 334 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 CNTN4Q8IWV2 1026 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 DEFB123Q8N688 67 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 ACDQ96AP0 544 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 RAD9AQ99638 391 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 C1QTNF1Q9BXJ1 281 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 CXorf21Q9HAI6 301 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 DNAJC11Q9NVH1 559 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 C1orf109Q9NX04 203 aa11.43□□□□□ -0.58
NPHP4-204ENST00000460696 PCDHGA7Q9Y5G6 932 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms