RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IL17BQ9UHF5 180 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 OSGIN1Q9UJX0 560 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 CCL27Q9Y4X3 112 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 KDM6BO15054 1643 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 A0A0G2JNG1 304 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 PLSCR5A0PG75 271 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 ASPDHA6ND91 283 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 ANKUB1A6NFN9 424 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 SMTNL1A8MU46 457 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 TCERG1O14776 1098 aaKnown RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 ZNF500O60304 480 aaPredicted RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 PDE9AO76083 593 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 BMP10O95393 424 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 TRUB2O95900 331 aaKnown RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 FYNP06241 537 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 SNRNP70P08621 437 aaKnown RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 LINGO3P0C6S8 592 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 FGF3P11487 239 aaPredicted RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 ZNF23P17027 643 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 MCCP23508 829 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 GABRA5P31644 462 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 MC5RP33032 325 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 AMPHP49418 695 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 RPL24P83731 157 aaKnown RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 KIR2DS5Q14953 304 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 C1orf141Q5JVX7 400 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 RNASEH2BQ5TBB1 312 aaKnown RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 FAM171BQ6P995 826 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 FAM198BQ6UWH4 519 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 LINGO4Q6UY18 593 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 DSG4Q86SJ6 1040 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 TMEM173Q86WV6 379 aaPredicted RBP3.23□□□□□ -1.89
RFC4-211ENST00000460408 CEP57L1Q8IYX8 460 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 KCNH5Q8NCM2 988 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 SPATA20Q8TB22 786 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 ZFAND2BQ8WV99 257 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 TEKT4Q8WW24 435 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 LINGO1Q96FE5 620 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 FAM81BQ96LP2 452 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 CFAP57Q96MR6 1250 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 MS4A10Q96PG2 267 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 DUX5Q96PT3 197 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 PKP4Q99569 1192 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 AP1M1Q9BXS5 423 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 DPAGT1Q9H3H5 408 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 ST6GALNAC4Q9H4F1 302 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 EVA1AQ9H8M9 152 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 OSER1Q9NX31 292 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 PCDHGB1Q9Y5G3 927 aa3.23□□□□□ -1.89
RFC4-211ENST00000460408 ATAD2BQ9ULI0 1458 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 C15orf62A8K5M9 175 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 ACOT8O14734 319 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 XRCC3O43542 346 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 GPR137BO60478 399 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 TADA2AO75478 443 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 SLCO2B1O94956 709 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 GGPS1O95749 300 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 TFAP2AP05549 437 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 LIPFP07098 398 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 CSF2RAP15509 400 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 PFKFB1P16118 471 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 ZNF132P52740 706 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 CSE1LP55060 971 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 MLLT10P55197 1068 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 PITX1P78337 314 aaPredicted RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 PRKAA1Q13131 559 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 IZUMO4Q1ZYL8 232 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 LETM2Q2VYF4 491 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 KLHL26Q53HC5 615 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 FAM133BQ5BKY9 247 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 CST9LP1Q5W188 147 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 KRT80Q6KB66 452 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 ZNF771Q7L3S4 317 aaPredicted RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 DGLUCYQ7Z3D6 616 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 PIWIL4Q7Z3Z4 852 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 PTOV1Q86YD1 416 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 L3MBTL4Q8NA19 623 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 KBTBD3Q8NAB2 608 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 Q8NFD4 153 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 MOSPD2Q8NHP6 518 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 EXD1Q8NHP7 514 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 SECTM1Q8WVN6 248 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 SEMA4DQ92854 862 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 DAZLQ92904 295 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 VPS33AQ96AX1 596 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 NXNL1Q96CM4 212 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 RMDN1Q96DB5 314 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 OXNAD1Q96HP4 312 aaPredicted RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 ABHD8Q96I13 439 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 NOL11Q9H8H0 719 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 CNOT10Q9H9A5 744 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 ERVMER34-1Q9H9K5 563 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 FKRPQ9H9S5 495 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 ZNF556Q9HAH1 456 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 TRPC7Q9HCX4 862 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 MIOSQ9NXC5 875 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms