RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SH3GL1Q99961 368 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 H2AFJQ9BTM1 129 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 SLC2A11Q9BYW1 496 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ABCB8Q9NUT2 735 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ARL15Q9NXU5 204 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 HECAQ9UBI9 543 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-203ENST00000460265 POLG2Q9UHN1 485 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 A0A1W2PQ67 120 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ANKRD34BA5PLL1 514 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 RAD51BO15315 384 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 KERAO60938 352 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 BMP10O95393 424 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ARF5P84085 180 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 CACUL1Q86Y37 369 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 NUDT8Q8WV74 236 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 PLD4Q96BZ4 506 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 EFHD2Q96C19 240 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-203ENST00000460265 MGME1Q9BQP7 344 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 PCDH12Q9NPG4 1184 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 SPG21Q9NZD8 308 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 CXCL14O95715 111 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ENO2P09104 434 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 COL6A1P12109 1028 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 DGKQP52824 942 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 CTBSQ01459 385 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 HMGCS1Q01581 520 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 CBLBQ13191 982 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 MRPL58Q14197 206 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 PGS1Q32NB8 556 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TICAM1Q8IUC6 712 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TMEM126BQ8IUX1 230 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 BBS7Q8IWZ6 715 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 PYCR2Q96C36 320 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ASB2Q96Q27 587 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TRIM15Q9C019 465 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 NAA50Q9GZZ1 169 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 INTS10Q9NVR2 710 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 LCHNA4D1U4 455 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 NEDD8-MDP1E9PL57 170 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 SLC22A3O75751 556 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 EIF2S1P05198 315 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ALDOCP09972 364 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 PBLDP30039 288 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ADSLP30566 484 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TXNL4AP83876 142 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TCTN1Q2MV58 587 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 AP5B1Q2VPB7 878 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF683Q8IZ20 524 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 CADM3Q8N126 398 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 WFDC5Q8TCV5 224 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 TRUB1Q8WWH5 349 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 POLR3HQ9Y535 204 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 PLOD2O00469 737 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF26P17031 533 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 SERPINA4P29622 427 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 RPS3AP61247 264 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ZC3H7AQ8IWR0 971 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 SLC22A17Q8WUG5 538 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 FUBP1Q96AE4 644 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 CEP295NLQ96MC4 621 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 ELAC1Q9H777 363 aaKnown RBP15.16■□□□□ 0.02
LMNB1-203ENST00000460265 MEAF6Q9HAF1 191 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 OPTCQ9UBM4 332 aa15.16■□□□□ 0.02
LMNB1-203ENST00000460265 VNN2O95498 520 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 IGSF6O95976 241 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 DEFB103AP81534 67 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 ANGPTL8Q6UXH0 198 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 SYVN1Q86TM6 617 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 C2orf15Q8WU43 125 aaKnown RBP15.15■□□□□ 0.02
LMNB1-203ENST00000460265 FIG4Q92562 907 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 DLG3Q92796 817 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CENPOQ9BU64 300 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 FAM126AQ9BYI3 521 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-203ENST00000460265 ATP13A3Q9H7F0 1226 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 PCDHGA7Q9Y5G6 932 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 GLYATL1P3A0A0U1RQE8 302 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 TEX28O15482 410 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 MLYCDO95822 493 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CSF2RAP15509 400 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CCNA2P20248 432 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 APLP1P51693 650 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 OCA2Q04671 838 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 ANKRD26P1Q6NSI1 321 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 MBOAT1Q6ZNC8 495 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 IGFN1Q86VF2 1251 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 Q8N9G6 341 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-203ENST00000460265 TCF12Q99081 682 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CTRCQ99895 268 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 F5P12259 2224 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 BCAS2O75934 225 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-203ENST00000460265 LRATO95237 230 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 KCNH1O95259 989 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 NNMTP40261 264 aa15.15■□□□□ 0.02
LMNB1-203ENST00000460265 CBX2Q14781 532 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-203ENST00000460265 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms