RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 USP7Q93009 1102 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 C9orf72Q96LT7 481 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 KIR3DX1Q9H7L2 352 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 SLC24A2Q9UI40 661 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 EFCAB7A8K855 629 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 PRMT5O14744 637 aaPredicted RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 ANKRD34CP0C6C1 535 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 FGF3P11487 239 aaPredicted RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 MAGEA3P43357 314 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 LEPRP48357 1165 aaKnown RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 CD151P48509 253 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 BRD3Q15059 726 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 TMEM164Q5U3C3 297 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 IRGCQ6NXR0 463 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 SYDE1Q6ZW31 735 aaPredicted RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 PDZD3Q86UT5 571 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 SPACA3Q8IXA5 215 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 ZNF669Q96BR6 464 aaPredicted RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 TRIM56Q9BRZ2 755 aaKnown RBP20.23■□□□□ 0.83
VARS-218ENST00000459667 TSSK1BQ9BXA7 367 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 OCIAD1Q9NX40 245 aa20.23■□□□□ 0.83
VARS-218ENST00000459667 FAM237BA0A1B0GVD1 139 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 MAGEB16A2A368 324 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 C9orf172C9J069 976 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 GOLGA8KD6RF30 607 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 GOLGA8TH3BQL2 631 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 NDUFS3O75489 264 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 ITGB6P18564 788 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 DR1Q01658 176 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 DHX34Q14147 1143 aaKnown RBP20.22■□□□□ 0.83
VARS-218ENST00000459667 COL28A1Q2UY09 1125 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 IZUMO3Q5VZ72 239 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 MRNIPQ6NTE8 343 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 NAPRTQ6XQN6 538 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 PCGF5Q86SE9 256 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 ART4Q93070 314 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 ZDHHC12Q96GR4 267 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 C16orf45Q96MC5 204 aaPredicted RBP20.22■□□□□ 0.83
VARS-218ENST00000459667 TAAR9Q96RI9 348 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 FERD3LQ96RJ6 166 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 RAB33BQ9H082 229 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 FOXJ2Q9P0K8 574 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 EPHA6Q9UF33 1036 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 ACSL6Q9UKU0 697 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 MAD1L1Q9Y6D9 718 aa20.22■□□□□ 0.83
VARS-218ENST00000459667 ADAMTS20P59510 1910 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 CELSR3Q9NYQ7 3312 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 SLC5A10A0PJK1 596 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 B4E171 279 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 TOX3O15405 576 aaPredicted RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 RASSF9O75901 435 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 TSPAN7P41732 249 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 ARCN1P48444 511 aaKnown RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 PLOD1Q02809 727 aaPredicted RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 ANKRD20A4Q4UJ75 823 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 FAM92BQ6ZTR7 304 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 SDCCAG8Q86SQ7 713 aaPredicted RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 HOOK3Q86VS8 718 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 OOSP2Q86WS3 158 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 ACVR1CQ8NER5 493 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 LKAAEAR1Q8TD35 194 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 TFGQ92734 400 aaPredicted RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 CARD6Q9BX69 1037 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 DPH1Q9BZG8 443 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 B3GNT4Q9C0J1 378 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 P2RY12Q9H244 342 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 MVB12BQ9H7P6 319 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 SLC39A1Q9NY26 324 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.21■□□□□ 0.83
VARS-218ENST00000459667 GNPTGQ9UJJ9 305 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 RPS6KL1Q9Y6S9 549 aa20.21■□□□□ 0.83
VARS-218ENST00000459667 UBA6A0AVT1 1052 aaPredicted RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 OR5K3A6NET4 321 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 IQCF5A8MTL0 148 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 PFDN6O15212 129 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 KLK10O43240 276 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 KIF1CO43896 1103 aaKnown RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 TUBB4AP04350 444 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 OGNP20774 298 aaKnown RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 RPS3P23396 243 aaKnown RBP eCLIP20.2■□□□□ 0.825e-7■■□□□ 13.9
VARS-218ENST00000459667 CCR7P32248 378 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 SEPHS1P49903 392 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 CSE1LP55060 971 aaKnown RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 PPP1CAP62136 330 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 TLE3Q04726 772 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 TYSND1Q2T9J0 566 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 RNF187Q5TA31 235 aaPredicted RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 PTRHD1Q6GMV3 140 aaKnown RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 PRSS42Q7Z5A4 293 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 TMEM135Q86UB9 458 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 LRRC6Q86X45 466 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 KRT222Q8N1A0 295 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 AGGF1Q8N302 714 aaeCLIP20.2■□□□□ 0.82
VARS-218ENST00000459667 BMPERQ8N8U9 685 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 PHC3Q8NDX5 983 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 PMEPA1Q969W9 287 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 SIGLEC10Q96LC7 697 aa20.2■□□□□ 0.82
VARS-218ENST00000459667 FCRL3Q96P31 734 aaPredicted RBP20.2■□□□□ 0.82
VARS-218ENST00000459667 TRIM51Q9BSJ1 452 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms