RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CFAP20Q9Y6A4 193 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 FAM169AQ9Y6X4 670 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 MYLKQ15746 1914 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 CEP295Q9C0D2 2601 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 UBA6A0AVT1 1052 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 SLC5A10A0PJK1 596 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 SRRM3A6NNA2 597 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 C9P02748 559 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 ESR1P03372 595 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 MPSTP25325 297 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 ARNTP27540 789 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 CAPZBP47756 277 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 ADARP55265 1226 aaKnown RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 ARL4CP56559 192 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 PRKAA1Q13131 559 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 CALCOCO2Q13137 446 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 TUBB2AQ13885 445 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 C16orf72Q14CZ0 275 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 TYSND1Q2T9J0 566 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 ZNF658BQ4V348 819 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 SNAP47Q5SQN1 464 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 ARHGAP22Q7Z5H3 698 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 CLEC14AQ86T13 490 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 PDZD3Q86UT5 571 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 OOSP2Q86WS3 158 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
CD28-203ENST00000458610 ZNF248Q8NDW4 579 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 PRR11Q96HE9 360 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 C16orf45Q96MC5 204 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 EBNA1BP2Q99848 306 aaKnown RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 TUBB2BQ9BVA1 445 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 C20orf96Q9NUD7 363 aaPredicted RBP15.76■□□□□ 0.11
CD28-203ENST00000458610 POLG2Q9UHN1 485 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 RAXQ9Y2V3 346 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
CD28-203ENST00000458610 MN1Q10571 1320 aaPredicted RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 ZCWPW2A0A1B0GU75 182 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 A8MU76 341 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TAF4O00268 1085 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 MATN2O00339 956 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 NVLO15381 856 aaKnown RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 CAPN5O15484 640 aaPredicted RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 RPN2P04844 631 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 ANKRD34CP0C6C1 535 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 PDHA2P29803 388 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 PREPP48147 710 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 ITGA8P53708 1063 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 EIF3BP55884 814 aaKnown RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 HSPA14Q0VDF9 509 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 BBS9Q3SYG4 887 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 SPANXN3Q5MJ09 141 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 HIBCHQ6NVY1 386 aaPredicted RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 CYB5D1Q6P9G0 228 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 CILP2Q8IUL8 1156 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TBC1D21Q8IYX1 336 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 LILRA3Q8N6C8 439 aaPredicted RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 RCBTB1Q8NDN9 531 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 C9orf72Q96LT7 481 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 FCRL3Q96P31 734 aaPredicted RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 TAAR9Q96RI9 348 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 CD180Q99467 661 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 ERP44Q9BS26 406 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TRIM51Q9BSJ1 452 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 FAM167BQ9BTA0 163 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 ASPSCR1Q9BZE9 553 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 P2RY12Q9H244 342 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 CCDC68Q9H2F9 335 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TRIT1Q9H3H1 467 aaKnown RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 SRMSQ9H3Y6 488 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TFB2MQ9H5Q4 396 aaKnown RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 ASCL3Q9NQ33 180 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 HRASLS2Q9NWW9 162 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 OGFRQ9NZT2 677 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 TMEM9Q9P0T7 183 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 CDC23Q9UJX2 597 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 ASF1AQ9Y294 204 aa15.75■□□□□ 0.11
CD28-203ENST00000458610 UTP11Q9Y3A2 253 aaKnown RBP15.75■□□□□ 0.11
CD28-203ENST00000458610 PRAMEF33A0A0G2JMD5 474 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 A0A1W2PNU3 283 aaPredicted RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 CDRT15L2A8MXV6 281 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 B4E171 279 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 GOLGA8KD6RF30 607 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 GOLGA8TH3BQL2 631 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 URI1O94763 535 aaPredicted RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 SEC31AO94979 1220 aaKnown RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 ITGB6P18564 788 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 CD82P27701 267 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 FMO4P31512 558 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 CCR7P32248 378 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 EIF2S3P41091 472 aaKnown RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 TSPAN7P41732 249 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 MAPK10P53779 464 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 RAB15P59190 212 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 DHX9Q08211 1270 aaKnown RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 BRD3Q15059 726 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 HIF1AQ16665 826 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 IRGCQ6NXR0 463 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 TTC23LQ6PF05 361 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 XKR5Q6UX68 686 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms