RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 THRAP10827 490 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 PDHA2P29803 388 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 CAPZBP47756 277 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 EIF3BP55884 814 aaKnown RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 GABREP78334 506 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 CFHR1Q03591 330 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 BOP1Q14137 746 aaKnown RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 TMED2Q15363 201 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 SYTL3Q4VX76 610 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 NKAIN2Q5VXU1 208 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 ZNF470Q6ECI4 717 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 PTRHD1Q6GMV3 140 aaKnown RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 KLHL35Q6PF15 583 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 ZNF574Q6ZN55 896 aaPredicted RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 USP53Q70EK8 1073 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 CENPUQ71F23 418 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 RAB11FIP2Q7L804 512 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 PLXDC1Q8IUK5 500 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 KIF18AQ8NI77 898 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 ASZ1Q8WWH4 475 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 ZCCHC14Q8WYQ9 949 aaKnown RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 BIRC8Q96P09 236 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 CMKLR1Q99788 373 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 TBC1D10AQ9BXI6 508 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 FOXP3Q9BZS1 431 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 RAB33BQ9H082 229 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 MVB12BQ9H7P6 319 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 C20orf96Q9NUD7 363 aaPredicted RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 EPHA6Q9UF33 1036 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 SLC24A2Q9UI40 661 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 SATB2Q9UPW6 733 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 SNX24Q9Y343 169 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
SP140-207ENST00000456542 TEX264Q9Y6I9 313 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 COLEC10Q9Y6Z7 277 aa8.3□□□□□ -1.08
SP140-207ENST00000456542 URB1O60287 2271 aaKnown RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 PRAMEF33A0A0G2JMD5 474 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 A0A1W2PNU3 283 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 PLD2O14939 933 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 EIF3HO15372 352 aaKnown RBP eCLIP8.29□□□□□ -1.08
SP140-207ENST00000456542 TOX3O15405 576 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 BANF1O75531 89 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 S1PR4O95977 384 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 MPOP05164 745 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 APOA4P06727 396 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ITGA2BP08514 1039 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ANKRD34CP0C6C1 535 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 AMD1P17707 334 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 AOAHP28039 575 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ACADLP28330 430 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 CCR7P32248 378 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ELK3P41970 407 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 SLC1A2P43004 574 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PREPP48147 710 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PPM1FP49593 454 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 ERVPABLB-1P60509 514 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 MRPS25P82663 173 aaKnown RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 CAV1Q03135 178 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 CYP4F3Q08477 520 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 FRG1Q14331 258 aaKnown RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 PLCL1Q15111 1095 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 C3orf38Q5JPI3 329 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 CTSL3PQ5NE16 218 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PHF19Q5T6S3 580 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 STEAP4Q687X5 459 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 C8orf74Q6P047 294 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 DUS1LQ6P1R4 473 aaKnown RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 UNC5AQ6ZN44 842 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 KIAA0408Q6ZU52 694 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ARHGAP22Q7Z5H3 698 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 GALNT7Q86SF2 657 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 KCNMB4Q86W47 210 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PROSER1Q86XN7 944 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 IGDCC3Q8IVU1 814 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 DENND6AQ8IWF6 608 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 CNTN4Q8IWV2 1026 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 SLC22A15Q8IZD6 547 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 MMGT1Q8N4V1 131 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 MNS1Q8NEH6 495 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ACVR1CQ8NER5 493 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 MDM1Q8TC05 714 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 LKAAEAR1Q8TD35 194 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 NCSTNQ92542 709 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 RSC1A1Q92681 617 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 TFGQ92734 400 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 CERS2Q96G23 380 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PRR11Q96HE9 360 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 CCDC74BQ96LY2 380 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 ZNF578Q96N58 590 aaPredicted RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
SP140-207ENST00000456542 B3GNT4Q9C0J1 378 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 DPH5Q9H2P9 285 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 SEMA6CQ9H3T2 930 aa8.29□□□□□ -1.08
SP140-207ENST00000456542 PLAC1Q9HBJ0 212 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms