RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 IFNGP01579 166 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 APOC1P02654 83 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 IL7RP16871 459 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 HTR2AP28223 471 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF81P51508 661 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DCST1Q5T197 706 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SPOUT1Q5T280 376 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GCNT6Q5T4J0 391 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM198Q66K66 360 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 LRRC52Q8N7C0 313 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 OR52K2Q8NGK3 314 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 BPIFB1Q8TDL5 484 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ERLEC1Q96DZ1 483 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SCRN2Q96FV2 425 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PYURFQ96I23 114 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NIPAL2Q9H841 368 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 IL1RAPQ9NPH3 570 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RAD18Q9NS91 495 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 C14orf105Q9NVL8 296 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 UCKL1Q9NWZ5 548 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ZSCAN32Q9NX65 697 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ARL15Q9NXU5 204 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NKIRAS2Q9NYR9 191 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM181Q9P2C4 612 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHGB5Q9Y5G0 923 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 FAM86C2PA6NEL3 165 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TRIM64A6NGJ6 449 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TRIM64BA6NI03 449 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 C2CD4BA6NLJ0 364 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CXorf49A8MYA2 514 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TISP43B9A030 160 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SLC1A7O00341 560 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PER2O15055 1255 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PROM1O43490 865 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 UGT2B17O75795 530 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SNAP29O95721 258 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RLN1P04808 185 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ITGB1P05556 798 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SRPRAP08240 638 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 JUNBP17275 347 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DNASE1P24855 282 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GMPRP36959 345 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PLA2G16P53816 162 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CTBP2P56545 445 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GALNT1Q10472 559 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 KCNAB2Q13303 367 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 APOFQ13790 326 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GALEQ14376 348 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PTGR1Q14914 329 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SIX1Q15475 284 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DPYSL2Q16555 572 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NDUFA9Q16795 377 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 C4orf46Q504U0 113 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CERCAMQ5T4B2 595 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NAPRTQ6XQN6 538 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 USP45Q70EL2 814 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SMIM5Q71RC9 77 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DET1Q7L5Y6 550 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GALNT7Q86SF2 657 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 COMMD7Q86VX2 200 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 OR8K5Q8NH50 307 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CEP76Q8TAP6 659 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TMIGD2Q96BF3 282 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MYO19Q96H55 970 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CCDC115Q96NT0 180 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TTYH2Q9BSA4 534 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DHRS4Q9BTZ2 278 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ATP13A3Q9H7F0 1226 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NT5DC2Q9H857 520 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RNF121Q9H920 327 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 FAM105AQ9NUU6 356 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NDUFAF4Q9P032 175 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 COMMD3Q9UBI1 195 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ZDHHC2Q9UIJ5 367 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ERVW-1Q9UQF0 538 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 KRBOX1C9JBD0 128 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PITPNM1O00562 1244 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DLX3O60479 287 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 KERAO60938 352 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RPP40O75818 363 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RASGRP1O95267 797 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MT-ND1P03886 318 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 AMHP03971 560 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CATP04040 527 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MAPK8P45983 427 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CDH8P55286 799 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 WNT3AP56704 352 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NFE2L1Q14494 772 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CPTPQ5TA50 214 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DCLRE1AQ6PJP8 1040 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 METTL7BQ6UX53 244 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CERS6Q6ZMG9 384 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PDZD9Q8IXQ8 264 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CPNE9Q8IYJ1 553 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SAMD14Q8IZD0 417 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SMG7Q92540 1137 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TCEAL3Q969E4 200 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NACC2Q96BF6 587 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms