RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ACVR1CQ8NER5 493 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 PPHLN1Q8NEY8 458 aaKnown RBP20.69■□□□□ 0.9
HMGB3-205ENST00000455596 HDAC10Q969S8 669 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 KIAA1143Q96AT1 154 aaPredicted RBP20.69■□□□□ 0.9
HMGB3-205ENST00000455596 FERD3LQ96RJ6 166 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 TTC1Q99614 292 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 MAP3K3Q99759 626 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 ULBP3Q9BZM4 244 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 OR52A5Q9H2C5 316 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 EIF2B3Q9NR50 452 aaKnown RBP20.69■□□□□ 0.9
HMGB3-205ENST00000455596 HOMER3Q9NSC5 361 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 SLC2A6Q9UGQ3 507 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 TCAF1Q9Y4C2 921 aa20.69■□□□□ 0.9
HMGB3-205ENST00000455596 MGAQ8IWI9 3026 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 IGHV5-51A0A0C4DH38 117 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 UBA6A0AVT1 1052 aaPredicted RBP20.68■□□□□ 0.9
HMGB3-205ENST00000455596 OR6C74A6NCV1 312 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 TLCD2A6NGC4 264 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 GOT2P00505 430 aaKnown RBP20.68■□□□□ 0.9
HMGB3-205ENST00000455596 FTH1P02794 183 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 ITGB2P05107 769 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 CD151P48509 253 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 PRAMEP78395 509 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 ACVR1Q04771 509 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 ABHD18Q0P651 414 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 MAP7Q14244 749 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 TIPARPQ7Z3E1 657 aaKnown RBP20.68■□□□□ 0.9
HMGB3-205ENST00000455596 KMT5CQ86Y97 462 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 RASGRP3Q8IV61 690 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 SIDT2Q8NBJ9 832 aaKnown RBP20.68■□□□□ 0.9
HMGB3-205ENST00000455596 PEX13Q92968 403 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 SLC41A2Q96JW4 573 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 EFHD1Q9BUP0 239 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 PRSS21Q9Y6M0 314 aa20.68■□□□□ 0.9
HMGB3-205ENST00000455596 LIN7AO14910 233 aaPredicted RBP20.67■□□□□ 0.9
HMGB3-205ENST00000455596 FGF5P12034 268 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 PDHA2P29803 388 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 KCNJ1P48048 391 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 ARL4DP49703 201 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 PRKAA1Q13131 559 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 CERS6Q6ZMG9 384 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 PPP1R3BQ86XI6 285 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 ESX1Q8N693 406 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 OR4E2Q8NGC2 313 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 OR6P1Q8NGX9 317 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 OR4L1Q8NH43 312 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 ELMO2Q96JJ3 720 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 ZNF778Q96MU6 729 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 ARHGAP9Q9BRR9 750 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 SLC12A9Q9BXP2 914 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 GPN2Q9H9Y4 310 aaPredicted RBP20.67■□□□□ 0.9
HMGB3-205ENST00000455596 GRPEL1Q9HAV7 217 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 PDE7BQ9NP56 450 aa20.67■□□□□ 0.9
HMGB3-205ENST00000455596 LOC101059948A0A1B0GTJ6 334 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 F8W8V4 182 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 AP3B1O00203 1094 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 OR56A5P0C7T3 313 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 ZNF28P17035 718 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 PPARGP37231 505 aaPredicted RBP20.66■□□□□ 0.9
HMGB3-205ENST00000455596 PREPP48147 710 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 CYP4F2P78329 520 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 LINC00303Q3SY05 128 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 FASTKD1Q53R41 847 aaKnown RBP20.66■□□□□ 0.9
HMGB3-205ENST00000455596 PCID2Q5JVF3 399 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 CARFQ8N187 725 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 ZNF843Q8N446 348 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 LCN9Q8WX39 176 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 ELMO1Q92556 727 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 TFGQ92734 400 aaPredicted RBP20.66■□□□□ 0.9
HMGB3-205ENST00000455596 EXTL1Q92935 676 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 SGSM3Q96HU1 749 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 SRMSQ9H3Y6 488 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 MVB12BQ9H7P6 319 aa20.66■□□□□ 0.9
HMGB3-205ENST00000455596 MATN2O00339 956 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 SPAG6O75602 509 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 KIAA0754O94854 1291 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 POLR2CP19387 275 aaPredicted RBP20.65■□□□□ 0.9
HMGB3-205ENST00000455596 ARCN1P48444 511 aaKnown RBP20.65■□□□□ 0.9
HMGB3-205ENST00000455596 KPNA2P52292 529 aaKnown RBP20.65■□□□□ 0.9
HMGB3-205ENST00000455596 SESN2P58004 480 aaPredicted RBP20.65■□□□□ 0.9
HMGB3-205ENST00000455596 HSD11B2P80365 405 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 ACY1Q03154 408 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 TUBB3Q13509 450 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.65■□□□□ 0.9
HMGB3-205ENST00000455596 PHC3Q8NDX5 983 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 MED8Q96G25 268 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 SEMA4CQ9C0C4 833 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 CHRAC1Q9NRG0 131 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 ANAPC5Q9UJX4 755 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 RARRES3Q9UL19 164 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 JRKLQ9Y4A0 524 aa20.65■□□□□ 0.9
HMGB3-205ENST00000455596 ZNF891A8MT65 544 aaPredicted RBP20.64■□□□□ 0.89
HMGB3-205ENST00000455596 OR1I1O60431 355 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 ZBTB11O95625 1053 aaPredicted RBP20.64■□□□□ 0.89
HMGB3-205ENST00000455596 FOLR1P15328 257 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 STAT5AP42229 794 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 NPY2RP49146 381 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 KCNAB1Q14722 419 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 BRD3Q15059 726 aa20.64■□□□□ 0.89
HMGB3-205ENST00000455596 C6orf15Q6UXA7 325 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms