RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 OTOAQ7RTW8 1153 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 LRRTM4Q86VH4 590 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 SFTPA2Q8IWL1 248 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 RGL4Q8IZJ4 473 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 KLHDC7BQ96G42 594 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.69
SCN9A-205ENST00000454569 WDR92Q96MX6 357 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 PANX3Q96QZ0 392 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 NRTNQ99748 197 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 MECRQ9BV79 373 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 TMEM168Q9H0V1 697 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 ALG9Q9H6U8 611 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 CARS2Q9HA77 564 aaKnown RBP10.77□□□□□ -0.69
SCN9A-205ENST00000454569 FSCN3Q9NQT6 498 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 DCDC2Q9UHG0 476 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 ADAM21Q9UKJ8 722 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
SCN9A-205ENST00000454569 CACNA1HO95180 2353 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 GOLGA4Q13439 2230 aaKnown RBP10.76□□□□□ -0.69
SCN9A-205ENST00000454569 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 MGAT4DA6NG13 374 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 G3V2L1 256 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 GLRA3O75311 464 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 FTH1P02794 183 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 DHRS4L1P0CG22 281 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 TFEBP19484 476 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 RABIFP47224 123 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 CCT5P48643 541 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 THOP1P52888 689 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 IL2P60568 153 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 SRP54P61011 504 aaKnown RBP10.76□□□□□ -0.69
SCN9A-205ENST00000454569 TSNQ15631 228 aaKnown RBP10.76□□□□□ -0.69
SCN9A-205ENST00000454569 LPAL2Q16609 132 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 CCSMST1Q4G0I0 132 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 TECRLQ5HYJ1 363 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 ATG14Q6ZNE5 492 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 LPCAT2Q7L5N7 544 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 TBC1D1Q86TI0 1168 aaPredicted RBP10.76□□□□□ -0.69
SCN9A-205ENST00000454569 NRROSQ86YC3 692 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 HID1Q8IV36 788 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 OXR1Q8N573 874 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 ZBTB44Q8NCP5 570 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 OR2L2Q8NH16 312 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 CABS1Q96KC9 395 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 ZCCHC2Q9C0B9 1178 aaKnown RBP10.76□□□□□ -0.69
SCN9A-205ENST00000454569 DERL2Q9GZP9 239 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 COG4Q9H9E3 785 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 SYTL2Q9HCH5 934 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 KLC4Q9NSK0 619 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 PSMD13Q9UNM6 376 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 ANKRD6Q9Y2G4 727 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 WDR37Q9Y2I8 494 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 GPR179Q6PRD1 2367 aa10.76□□□□□ -0.69
SCN9A-205ENST00000454569 PRAMEF33A0A0G2JMD5 474 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 TLR4O00206 839 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 KMOO15229 486 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 MAGEC1O60732 1142 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 COL6A2P12110 1019 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 MTHFD2P13995 350 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 RPL10P27635 214 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 RACK1P63244 317 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 CTBSQ01459 385 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 GUCY1A3Q02108 690 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 ABRQ12979 859 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 C1orf61Q13536 156 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 PHKG1Q16816 387 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 INSCQ1MX18 579 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 C18orf21Q32NC0 220 aaPredicted RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 FBXO48Q5FWF7 155 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 PLEKHS1Q5SXH7 462 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 FAM219BQ5XKK7 198 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 UGT3A1Q6NUS8 523 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 AMZ2Q86W34 360 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 NKAPQ8N5F7 415 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 LMNTD1Q8N9Z9 388 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 MFSD2AQ8NA29 543 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 ALKBH8Q96BT7 664 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 PDLIM5Q96HC4 596 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 SCYL1Q96KG9 808 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 ATOH8Q96SQ7 321 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 FAM126AQ9BYI3 521 aaPredicted RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 NMRAL1Q9HBL8 299 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 XPR1Q9UBH6 696 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 KLQ9UEF7 1012 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 CIDEBQ9UHD4 219 aa10.75□□□□□ -0.69
SCN9A-205ENST00000454569 SMG5Q9UPR3 1016 aaKnown RBP10.75□□□□□ -0.69
SCN9A-205ENST00000454569 C17orf113A0A1B0GUU1 675 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 A0A1B0GVT2 93 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 LRRC14BA6NHZ5 514 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 UBXN8O00124 270 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 BTN3A1O00481 513 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 RASGRP1O95267 797 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 APOA4P06727 396 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 GSTA1P08263 222 aa10.74□□□□□ -0.69
SCN9A-205ENST00000454569 DGKAP23743 735 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms