RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CHD1LQ86WJ1 897 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 PLXDC1Q8IUK5 500 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 CCAR2Q8N163 923 aaKnown RBP5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 MYCT1Q8N699 235 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 SLC37A2Q8TED4 501 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 MR1Q95460 341 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 CYFIP2Q96F07 1278 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 SLC39A13Q96H72 371 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 CNDP1Q96KN2 507 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 SIGLEC10Q96LC7 697 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 AGAP4Q96P64 663 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 IP6K3Q96PC2 410 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 GBP5Q96PP8 586 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 TWNKQ96RR1 684 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 LMF1Q96S06 567 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 PIP5K1AQ99755 562 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 PRMT1Q99873 361 aaKnown RBP5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 REEP2Q9BRK0 252 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 C1QTNF7Q9BXJ2 289 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 TKTL2Q9H0I9 626 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 WASH6PQ9NQA3 447 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 DMRT3Q9NQL9 472 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 RIC8BQ9NVN3 520 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 P4HTMQ9NXG6 502 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 SEMA5BQ9P283 1151 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 CDC42EP3Q9UKI2 254 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 FREM1Q5H8C1 2179 aa5.12□□□□□ -1.59
SBDSP1-204ENST00000453858 PCM1Q15154 2024 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PRSS38A1L453 326 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TCAF2A6NFQ2 919 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 YJEFN3A6XGL0 299 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 E7ENQ6 273 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 O00370 1275 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 NEMP1O14524 444 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ZNHIT1O43257 154 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 THAP12O43422 761 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 SNAP91O60641 907 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CYP7B1O75881 506 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 KLHL18O94889 574 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PRPF6O94906 941 aaKnown RBP5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ZBED1O96006 694 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TNNC2P02585 160 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ENO2P09104 434 aaPredicted RBP5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CHRNB4P30926 498 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 HADHAP40939 763 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TNFSF10P50591 281 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 NUCB1Q02818 461 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 MTM1Q13496 603 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 SSPNQ14714 243 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 IL17AQ16552 155 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 SLC30A9Q6PML9 568 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TEPPQ6URK8 271 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ARSKQ6UWY0 536 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 NAPRTQ6XQN6 538 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PPP1R32Q7Z5V6 425 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 C11orf96Q7Z7L8 435 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 P3H2Q8IVL5 708 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TMEM151BQ8IW70 566 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 DSELQ8IZU8 1212 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 LGI2Q8N0V4 545 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CLYBLQ8N0X4 340 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PELI3Q8N2H9 469 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ASB5Q8WWX0 329 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ZMYND19Q96E35 227 aaPredicted RBP5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TTC1Q99614 292 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 HEPHQ9BQS7 1158 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CBWD1Q9BRT8 395 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 GSDMCQ9BYG8 508 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 CD244Q9BZW8 370 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PCIF1Q9H4Z3 704 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 IFT22Q9H7X7 185 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 PARVGQ9HBI0 331 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 GCM1Q9NP62 436 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 COQ3Q9NZJ6 369 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 MCM8Q9UJA3 840 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 ODF2LQ9ULJ1 636 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 RNF6Q9Y252 685 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 TBC1D30Q9Y2I9 924 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 SPO11Q9Y5K1 396 aa5.11□□□□□ -1.59
SBDSP1-204ENST00000453858 LOC100653049A0A140TA62 436 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 FAM90A27PA6NNH2 459 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 IDSB3KWA1 339 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 ETV2O00321 342 aaPredicted RBP5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 KRT34O76011 436 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 ENDOD1O94919 500 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 TSPAN15O95858 294 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 LDHAP00338 332 aaKnown RBP5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 IGHEP01854 428 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 CRYABP02511 175 aaKnown RBP5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 PVRP15151 417 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 IDSP22304 550 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 ATICP31939 592 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 GKP32189 559 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 OTX2P32243 289 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 ABCD1P33897 745 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 PDE1BQ01064 536 aa5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 ILF3Q12906 894 aaKnown RBP eCLIP5.1□□□□□ -1.59
SBDSP1-204ENST00000453858 AIMP2Q13155 320 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms