RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PPFIA2O75334 1257 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 NAGAP17050 411 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 ACAT1P24752 427 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 MXI1P50539 228 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 ASCL1P50553 236 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 SNU13P55769 128 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRKCZQ05513 592 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 CDO1Q16878 200 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 TWISTNBQ3B726 338 aaPredicted RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 AARDQ4LEZ3 155 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 GRTP1Q5TC63 336 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 TXNRD3NBQ6F5E7 133 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 CYB5D1Q6P9G0 228 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 RTL3Q8N8U3 475 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 AMER3Q8N944 861 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 MIGA1Q8NAN2 632 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 RNASE8Q8TDE3 154 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 SMPDL3BQ92485 455 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 RIT1Q92963 219 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 SNRNP40Q96DI7 357 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 CHFRQ96EP1 664 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 TSGA13Q96PP4 275 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRAM1Q96QH2 718 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 PKP4Q99569 1192 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 FNDC11Q9BVV2 318 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 OSBPL8Q9BZF1 889 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 P2RY12Q9H244 342 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 R3HDMLQ9H3Y0 253 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 FN3KQ9H479 309 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 C17orf75Q9HAS0 396 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 HHATLQ9HCP6 504 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 PNPLA3Q9NST1 481 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 NINJ2Q9NZG7 142 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 VPS18Q9P253 973 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 SRPRBQ9Y5M8 271 aaKnown RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 ARHGEF17Q96PE2 2063 aaPredicted RBP4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 TAF1P21675 1872 aa4.05□□□□□ -1.76
HMGN3P1-201ENST00000453847 DHX29Q7Z478 1369 aaKnown RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ACEP12821 1306 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 C5orf51A6NDU8 294 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 NEMP2A6NFY4 417 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 SDR42E2A6NKP2 422 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 MEIS2O14770 477 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 HS3ST1O14792 307 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 TSPAN1O60635 241 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRAF2O60831 178 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 MOCS3O95396 460 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 IGHV2-70P01814 119 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 FGBP02675 491 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ANKRD34CP0C6C1 535 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 VCLP18206 1134 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 HPDP32754 393 aaPredicted RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 FRKP42685 505 aaPredicted RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 LHX1P48742 406 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 PLCD1P51178 756 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 MAPK12P53778 367 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 TPD52P55327 224 aaPredicted RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 HSD17B7P56937 341 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 GSDMDP57764 484 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 MAT1AQ00266 395 aaKnown RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 AMZ1Q400G9 498 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 Q4G0T1 1027 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 C10orf25Q5T742 122 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 SLC18B1Q6NT16 456 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 NOTUMQ6P988 496 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ZCCHC12Q6PEW1 402 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 TMPRSS11FQ6ZWK6 438 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ERC1Q8IUD2 1116 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 CLYBLQ8N0X4 340 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 OR52I2Q8NH67 350 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 B4GALNT2Q8NHY0 566 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 LRRC8CQ8TDW0 803 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ST7LQ8TDW4 575 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 OIT3Q8WWZ8 545 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 CENPTQ96BT3 561 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 COQ8BQ96D53 544 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 SEPHS2Q99611 448 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 RAD9AQ99638 391 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 KXD1Q9BQD3 176 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 FOXP1Q9H334 677 aaPredicted RBP4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 FZD3Q9NPG1 666 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 DNAJC11Q9NVH1 559 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ANO10Q9NW15 660 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 C1RLQ9NZP8 487 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 EPS15L1Q9UBC2 864 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 ATP6V0A2Q9Y487 856 aa4.04□□□□□ -1.76
HMGN3P1-201ENST00000453847 MAGEA13PA6NCF6 341 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 KRT87PA6NCN2 255 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 C5orf60A6NFR6 353 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 H0YIG0 161 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRPSAP2O60256 369 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SMIM18P0DKX4 95 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 TYMPP19971 482 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 EEF1B2P24534 225 aaKnown RBP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 CORO1AP31146 461 aaKnown RBP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SERPINB6P35237 376 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 CDKN1AP38936 164 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms