RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 FNBP1LQ5T0N5 605 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 ATP1A1-AS1Q5TC04 95 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 METRNLQ641Q3 311 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 KLHL35Q6PF15 583 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 DET1Q7L5Y6 550 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 OR52K1Q8NGK4 314 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 COG1Q8WTW3 980 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 APOBEC4Q8WW27 367 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 STAMBPL1Q96FJ0 436 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 ZNF514Q96K75 400 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 CASS4Q9NQ75 786 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 IMP3Q9NV31 184 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 NLE1Q9NVX2 485 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 PIH1D1Q9NWS0 290 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 LNPEPQ9UIQ6 1025 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 CROTQ9UKG9 612 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 SNX12Q9UMY4 172 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 PTPN13Q12923 2485 aa17.98■□□□□ 0.47
PDLIM2-214ENST00000452226 IGHV5-51A0A0C4DH38 117 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 SPAG6O75602 509 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 SPTBP11277 2137 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 MTHFD1P11586 935 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 FGF5P12034 268 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 POU6F1Q14863 301 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 PLCL1Q15111 1095 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 CYP1B1Q16678 543 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 CRTC2Q53ET0 693 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 PPP1R3BQ86XI6 285 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 BEND7Q8N7W2 519 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 ACTRT1Q8TDG2 376 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 STYXQ8WUJ0 223 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 DNAJC1Q96KC8 554 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 NAP1L3Q99457 506 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 ASB8Q9H765 288 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 EIF2B3Q9NR50 452 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 CFAP20Q9Y6A4 193 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 COL12A1Q99715 3063 aa17.97■□□□□ 0.47
PDLIM2-214ENST00000452226 PIKFYVEQ9Y2I7 2098 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 MGAT4DA6NG13 374 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 PGRMC1O00264 195 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 APRTP07741 180 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 TLE1Q04724 770 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 TTC27Q6P3X3 843 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 CYB5D1Q6P9G0 228 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 GSTA5Q7RTV2 222 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 SIDT2Q8NBJ9 832 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 C9orf43Q8TAL5 461 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 NAT14Q8WUY8 206 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 UBXN4Q92575 508 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 CDKN2AIPNLQ96HQ2 116 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 SLC41A2Q96JW4 573 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 WWP1Q9H0M0 922 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 PDE7BQ9NP56 450 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 ZNF71Q9NQZ8 489 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 SEMA5BQ9P283 1151 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 RIMKLBQ9ULI2 386 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 PCDHB3Q9Y5E6 796 aa17.96■□□□□ 0.47
PDLIM2-214ENST00000452226 TRBV5-4A0A0C4DH59 114 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 E7EVH7 732 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 CCL22O00626 93 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 KATNA1O75449 491 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 CCNYL3P0C7X3 344 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 FOLR1P15328 257 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 LMAN1P49257 510 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 TMPRSS15P98073 1019 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 TUBB3Q13509 450 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 KCNAB1Q14722 419 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 SKIDA1Q1XH10 827 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 GPR33Q49SQ1 333 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 PPP1R21Q6ZMI0 780 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 SNX20Q7Z614 316 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 DNAAF3Q8N9W5 541 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 OR2L2Q8NH16 312 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 MAGOHBQ96A72 148 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 ULK4Q96C45 1275 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 C12orf66Q96MD2 445 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 RANBP9Q96S59 729 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 INSM2Q96T92 566 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 MAP3K3Q99759 626 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 AP1M1Q9BXS5 423 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 SMARCAL1Q9NZC9 954 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 FAM8A1Q9UBU6 413 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 ACSL5Q9ULC5 683 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 PADI1Q9ULC6 663 aa17.95■□□□□ 0.46
PDLIM2-214ENST00000452226 SEC16AO15027 2179 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 KLHL33A6NCF5 533 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 TIAF1O95411 115 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 ITGALP20701 1170 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 MC4RP32245 332 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 COILP38432 576 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 ARL4DP49703 201 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 SEPT6Q14141 434 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 ERV3-1Q14264 604 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 DNTTIP2Q5QJE6 756 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 DUS1LQ6P1R4 473 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 NXPE1Q8N323 547 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 DCUN1D1Q96GG9 259 aa17.94■□□□□ 0.46
PDLIM2-214ENST00000452226 ABHD17AQ96GS6 310 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms