RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 HMGB1P1B2RPK0 211 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 TM4SF5O14894 197 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SNRPAP09012 282 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 F3P13726 295 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 KRT15P19012 456 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CHRM3P20309 590 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 PDHA2P29803 388 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CLCN7P51798 805 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CDKN2DP55273 166 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 MAZP56270 477 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 TIAL1Q01085 375 aaKnown RBP eCLIP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 PROX2Q3B8N5 592 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SYTL3Q4VX76 610 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 AGAP9Q5VTM2 703 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 IYDQ6PHW0 289 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 ARL10Q8N8L6 244 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 FAM181AQ8N9Y4 354 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 GPR156Q8NFN8 814 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 GIMAP7Q8NHV1 300 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 VPS39Q96JC1 886 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CNDP2Q96KP4 475 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 RMDN2Q96LZ7 410 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SLC30A3Q99726 388 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 WWP1Q9H0M0 922 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 OR52A5Q9H2C5 316 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 EURLQ9NYK6 297 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SENP1Q9P0U3 644 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 FTSJ1Q9UET6 329 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 TBK1Q9UHD2 729 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CDV3Q9UKY7 258 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 COMMD10Q9Y6G5 202 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 FAM95CA0A1B0GW59 222 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 OR52A4PA6NMU1 304 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 E5RI56 91 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 GPC4O75487 556 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 LDOC1O95751 146 aaPredicted RBP12.75□□□□□ -0.37
VPS33A-202ENST00000451053 PGGT1BP53609 377 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 LIMK2P53671 638 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 HSPA14Q0VDF9 509 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 CLCA4Q14CN2 919 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 C14orf28Q4W4Y0 310 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 HECTD2Q5U5R9 776 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 WASH2PQ6VEQ5 465 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 OTOAQ7RTW8 1153 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 PIM3Q86V86 326 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 C17orf82Q86X59 251 aaPredicted RBP12.75□□□□□ -0.37
VPS33A-202ENST00000451053 VRK3Q8IV63 474 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 SFRP1Q8N474 314 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 SLC37A2Q8TED4 501 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 KCNJ9Q92806 393 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 TMEM159Q96B96 161 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ELMO2Q96JJ3 720 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ATP6V1G3Q96LB4 118 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 GPR21Q99679 349 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 OLFM1Q99784 485 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 WASH6PQ9NQA3 447 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ZNF624Q9P2J8 865 aaPredicted RBP12.75□□□□□ -0.37
VPS33A-202ENST00000451053 CTNNAL1Q9UBT7 734 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 ACSL5Q9ULC5 683 aa12.75□□□□□ -0.37
VPS33A-202ENST00000451053 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
VPS33A-202ENST00000451053 CFAP20Q9Y6A4 193 aaKnown RBP12.75□□□□□ -0.37
VPS33A-202ENST00000451053 RIF1Q5UIP0 2472 aaKnown RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 PRAMEF33A0A0G2JMD5 474 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 KPNA5O15131 536 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 VPS26AO75436 327 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 APOA4P06727 396 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 SLC35G4P0C7Q5 338 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 SLC2A4P14672 509 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 FDXRP22570 491 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 SERPINB8P50452 374 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 DAB2P98082 770 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 RPA4Q13156 261 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 GBX1Q14549 363 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 NR0B2Q15466 257 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 CAPRIN2Q6IMN6 1127 aaKnown RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 FAM45BPQ6NSW5 357 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 DUS1LQ6P1R4 473 aaKnown RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 SLC22A15Q8IZD6 547 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ARL14Q8N4G2 192 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 FAM45AQ8TCE6 357 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 MAPK15Q8TD08 544 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 CD200R1Q8TD46 325 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ASZ1Q8WWH4 475 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 GLMNQ92990 594 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 INSM2Q96T92 566 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 LATS2Q9NRM7 1088 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms