RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MPSTP25325 297 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 IGFALSP35858 605 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 TRIM23P36406 574 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 PREPP48147 710 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 PIK3CGP48736 1102 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CCR5P51681 352 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 THOP1P52888 689 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 AP1S2P56377 157 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ARHGAP8P85298 464 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CLCQ05315 142 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 GALNT1Q10472 559 aaPredicted RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 LCP2Q13094 533 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 RPA4Q13156 261 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 UNC50Q53HI1 259 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 SH2D4BQ5SQS7 431 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CGB2Q6NT52 195 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 FRMD7Q6ZUT3 714 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 CUZD1Q86UP6 607 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 HOMEZQ8IX15 550 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 GJD3Q8N144 294 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 SPEM1Q8N4L4 309 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ZNF781Q8N8C0 355 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 OR6Y1Q8NGX8 325 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 TRPC4APQ8TEL6 797 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ATL1Q8WXF7 558 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ASB11Q8WXH4 323 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 LRRC37BQ96QE4 947 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 IER2Q9BTL4 223 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 HGH1Q9BTY7 390 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 GPR174Q9BXC1 333 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 TMEM120AQ9BXJ8 343 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 STN1Q9H668 368 aaKnown RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 PRM3Q9NNZ6 103 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 MID1IP1Q9NPA3 183 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ACSS2Q9NR19 701 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 DNAJC28Q9NX36 388 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 MUTYHQ9UIF7 546 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 ADAMTS6Q9UKP5 1117 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 DMTF1Q9Y222 760 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 FIS1Q9Y3D6 152 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 MYOFQ9NZM1 2061 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 DOCK8Q8NF50 2099 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CCT8L1PA6NM43 557 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 HGSO14964 777 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 HDAC3O15379 428 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CCDC22O60826 627 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 SIX3O95343 332 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 IGLV3-19P01714 112 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 RPS17P08708 135 aaKnown RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 HOXC4P09017 264 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 SLC35G4P0C7Q5 338 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 MTHFD2P13995 350 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 MAGEA9P43362 315 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 GNPDA1P46926 289 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CXCL12P48061 93 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 HNMTP50135 292 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 HK3P52790 923 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CDH13P55290 713 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CLDN2P57739 230 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 KIAA1024LP59773 190 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CDKL1Q00532 357 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 PTK2BQ14289 1009 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 KRT33BQ14525 404 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 GBX1Q14549 363 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 NFATC4Q14934 902 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 PCBP2Q15366 365 aaKnown RBP eCLIP9.48□□□□□ -0.89
RFC4-210ENST00000449502 TMEM31Q5JXX7 168 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 SBSNQ6UWP8 590 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 ENPP7Q6UWV6 458 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 VRK3Q8IV63 474 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 SLC22A15Q8IZD6 547 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CLYBLQ8N0X4 340 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 RAB42Q8N4Z0 105 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CAMKK1Q8N5S9 505 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 GBP7Q8N8V2 638 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 SNX31Q8N9S9 440 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 PDPRQ8NCN5 879 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 PJA1Q8NG27 643 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 C10orf82Q8WW14 230 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CCDC138Q96M89 665 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 WDR92Q96MX6 357 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 SORT1Q99523 831 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 LGR4Q9BXB1 951 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 TPSD1Q9BZJ3 242 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 C20orf27Q9GZN8 174 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 CHRDQ9H2X0 955 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 DPEP2Q9H4A9 486 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 OSGEPL1Q9H4B0 414 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 SEMA4BQ9NPR2 832 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 OPTCQ9UBM4 332 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 EBF1Q9UH73 591 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 EIF2B4Q9UI10 523 aaKnown RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 MBD1Q9UIS9 605 aaPredicted RBP9.48□□□□□ -0.89
RFC4-210ENST00000449502 ACSL5Q9ULC5 683 aa9.48□□□□□ -0.89
RFC4-210ENST00000449502 TRIM33Q9UPN9 1127 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms