RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 QSOX1O00391 747 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 PHF2O75151 1096 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 RASSF9O75901 435 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 OR56A5P0C7T3 313 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 RAB15P59190 212 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 GNG11P61952 73 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 BRD3Q15059 726 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 ARHGAP40Q5TG30 622 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 ZNF449Q6P9G9 518 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 NAPRTQ6XQN6 538 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 GPR155Q7Z3F1 870 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 PRSS42Q7Z5A4 293 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 CAND1Q86VP6 1230 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 MPP5Q8N3R9 675 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 KLHL6Q8WZ60 621 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 ELMO1Q92556 727 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 MFSD3Q96ES6 412 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 CCNL2Q96S94 520 aaPredicted RBP12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 SPRY4Q9C004 299 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 MRM3Q9HC36 420 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 CATSPERZQ9NTU4 200 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 HRASLS2Q9NWW9 162 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 SOX13Q9UN79 622 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 PCDHB11Q9Y5F2 797 aa12.42□□□□□ -0.42
PRPF40A-203ENST00000448428 ZFHX4Q86UP3 3567 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SLC5A10A0PJK1 596 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 OR6C74A6NCV1 312 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 OR5K3A6NET4 321 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 IFRD1O00458 451 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 LIN7AO14910 233 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 LAMA5O15230 3695 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 TMEM63AO94886 807 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 FTH1P02794 183 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 TCP1P17987 556 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 ITGB6P18564 788 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 ARNTP27540 789 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 NDUFS1P28331 727 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 PPARGP37231 505 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SH3BP2P78314 561 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 VAC14Q08AM6 782 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SRSF6Q13247 344 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 CEACAM20Q6UY09 585 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 CCDC81Q6ZN84 652 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 MCUQ8NE86 351 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 ACVR1CQ8NER5 493 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 OR4E2Q8NGC2 313 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SNRNP27Q8WVK2 155 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 TFGQ92734 400 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 NKD1Q969G9 470 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 TEFMQ96QE5 360 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 NRTNQ99748 197 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 MVB12BQ9H7P6 319 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SIDT1Q9NXL6 827 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 SEMA5BQ9P283 1151 aa12.41□□□□□ -0.42
PRPF40A-203ENST00000448428 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 GOLGA6L10A0A0M3HER8 536 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 GOLGA8MH3BSY2 632 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 K7ENP7 123 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 VAPBO95292 243 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 NELFEP18615 380 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 POLR2CP19387 275 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 ACADLP28330 430 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 CCR7P32248 378 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 ARCN1P48444 511 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 FNTAP49354 379 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 TTPAP49638 278 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 FOXM1Q08050 763 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 PRKG2Q13237 762 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 BOP1Q14137 746 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 SOWAHCQ53LP3 525 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 AARS2Q5JTZ9 985 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 PAPD7Q5XG87 772 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 VASH2Q86V25 355 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 OOSP2Q86WS3 158 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 LCN9Q8WX39 176 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 CARD6Q9BX69 1037 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 SRMSQ9H3Y6 488 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 PILRAQ9UKJ1 303 aa12.4□□□□□ -0.42
PRPF40A-203ENST00000448428 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 TEX51A0A1B0GUA7 166 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 SDR42E2A6NKP2 422 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 F8W8V4 182 aa12.39□□□□□ -0.43
PRPF40A-203ENST00000448428 GOLGA8TH3BQL2 631 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms