RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 NXPE1Q8N323 547 aa27.54■■■□□ 2
CBX4-202ENST00000448310 SPATA13Q96N96 652 aa27.54■■■□□ 2
CBX4-202ENST00000448310 NRTNQ99748 197 aa27.54■■■□□ 2
CBX4-202ENST00000448310 TBL1YQ9BQ87 522 aa27.54■■■□□ 2
CBX4-202ENST00000448310 TRIM55Q9BYV6 548 aa27.54■■■□□ 2
CBX4-202ENST00000448310 COLEC10Q9Y6Z7 277 aa27.54■■■□□ 2
CBX4-202ENST00000448310 KLHL33A6NCF5 533 aa27.53■■■□□ 2
CBX4-202ENST00000448310 SOWAHDA6NJG2 315 aa27.53■■■□□ 2
CBX4-202ENST00000448310 CPNE3O75131 537 aaKnown RBP27.53■■■□□ 2
CBX4-202ENST00000448310 STK10O94804 968 aaKnown RBP27.53■■■□□ 2
CBX4-202ENST00000448310 PDGFAP04085 211 aa27.53■■■□□ 2
CBX4-202ENST00000448310 RALBP11234 206 aa27.53■■■□□ 2
CBX4-202ENST00000448310 ITGALP20701 1170 aa27.53■■■□□ 2
CBX4-202ENST00000448310 PTPN4P29074 926 aa27.53■■■□□ 2
CBX4-202ENST00000448310 NAP1L1P55209 391 aaKnown RBP27.53■■■□□ 2
CBX4-202ENST00000448310 GPS2Q13227 327 aa27.53■■■□□ 2
CBX4-202ENST00000448310 PRAMEF17Q5VTA0 474 aa27.53■■■□□ 2
CBX4-202ENST00000448310 TEX19Q8NA77 164 aa27.53■■■□□ 2
CBX4-202ENST00000448310 HM13Q8TCT9 377 aa27.53■■■□□ 2
CBX4-202ENST00000448310 MR1Q95460 341 aa27.53■■■□□ 2
CBX4-202ENST00000448310 ULK4Q96C45 1275 aa27.53■■■□□ 2
CBX4-202ENST00000448310 COPS8Q99627 209 aa27.53■■■□□ 2
CBX4-202ENST00000448310 TLR10Q9BXR5 811 aa27.53■■■□□ 2
CBX4-202ENST00000448310 KCND1Q9NSA2 647 aa27.53■■■□□ 2
CBX4-202ENST00000448310 EFR3BQ9Y2G0 817 aa27.53■■■□□ 2
CBX4-202ENST00000448310 RECKO95980 971 aa27.52■■■□□ 2
CBX4-202ENST00000448310 PTPN7P35236 360 aa27.52■■■□□ 2
CBX4-202ENST00000448310 CDKN1CP49918 316 aaPredicted RBP27.52■■■□□ 2
CBX4-202ENST00000448310 SEMA5AQ13591 1074 aa27.52■■■□□ 2
CBX4-202ENST00000448310 IL10RAQ13651 578 aa27.52■■■□□ 2
CBX4-202ENST00000448310 TMTC4Q5T4D3 741 aa27.52■■■□□ 2
CBX4-202ENST00000448310 SNX20Q7Z614 316 aa27.52■■■□□ 2
CBX4-202ENST00000448310 SLC38A9Q8NBW4 561 aa27.52■■■□□ 2
CBX4-202ENST00000448310 ALG3Q92685 438 aa27.52■■■□□ 2
CBX4-202ENST00000448310 GPR87Q9BY21 358 aa27.52■■■□□ 2
CBX4-202ENST00000448310 BTRCQ9Y297 605 aa27.52■■■□□ 2
CBX4-202ENST00000448310 EPN1Q9Y6I3 576 aaPredicted RBP27.52■■■□□ 2
CBX4-202ENST00000448310 CCDC66A2RUB6 948 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 SLC9B1P1A6NJY1 282 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 PRSS56P0CW18 603 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 PYGMP11217 842 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 ATP1B2P14415 290 aaPredicted RBP27.51■■□□□ 1.99
CBX4-202ENST00000448310 CDH3P22223 829 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 NDUFS1P28331 727 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 MC4RP32245 332 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 MLLT10P55197 1068 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 RWDD2BP57060 319 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 RPS15P62841 145 aaKnown RBP27.51■■□□□ 1.99
CBX4-202ENST00000448310 PDE1BQ01064 536 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 CHAF1BQ13112 559 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 PRKAA1Q13131 559 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 LAMB3Q13751 1172 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 UBAP2LQ14157 1087 aaKnown RBP27.51■■□□□ 1.99
CBX4-202ENST00000448310 UGT8Q16880 541 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 CPZQ66K79 652 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 APLFQ8IW19 511 aaPredicted RBP27.51■■□□□ 1.99
CBX4-202ENST00000448310 DNAJC1Q96KC8 554 aaKnown RBP27.51■■□□□ 1.99
CBX4-202ENST00000448310 FERD3LQ96RJ6 166 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 CCM2Q9BSQ5 444 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 COG4Q9H9E3 785 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 POMT2Q9UKY4 750 aa27.51■■□□□ 1.99
CBX4-202ENST00000448310 GSAPA4D1B5 854 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 CFAP99D6REC4 459 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 LDB2O43679 373 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 HADHAP40939 763 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 SRSF1Q07955 248 aaKnown RBP eCLIP27.5■■□□□ 1.99
CBX4-202ENST00000448310 ACVR1CQ8NER5 493 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 LCN9Q8WX39 176 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 CHST8Q9H2A9 424 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 FARSAQ9Y285 508 aaKnown RBP27.5■■□□□ 1.99
CBX4-202ENST00000448310 REXO2Q9Y3B8 237 aaKnown RBP27.5■■□□□ 1.99
CBX4-202ENST00000448310 HEBP2Q9Y5Z4 205 aa27.5■■□□□ 1.99
CBX4-202ENST00000448310 ABRQ12979 859 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 ZRANB3Q5FWF4 1079 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 LCN10Q6JVE6 187 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 SYVN1Q86TM6 617 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 CARFQ8N187 725 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 OR8K5Q8NH50 307 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 MIB2Q96AX9 1013 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 LACRTQ9GZZ8 138 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 OR52A5Q9H2C5 316 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 SRMSQ9H3Y6 488 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 ARNT2Q9HBZ2 717 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 ZDHHC3Q9NYG2 299 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 ANKMY1Q9P2S6 941 aa27.49■■□□□ 1.99
CBX4-202ENST00000448310 SEC16AO15027 2179 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 ARGFXA6NJG6 315 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 BTN3A3O00478 584 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 TJP3O95049 919 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 TPH1P17752 444 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 PDHA2P29803 388 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 SERPINA9Q86WD7 417 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 PHC3Q8NDX5 983 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 SEC14L1Q92503 715 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 LATS2Q9NRM7 1088 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 C1GALT1Q9NS00 363 aa27.48■■□□□ 1.99
CBX4-202ENST00000448310 C17orf113A0A1B0GUU1 675 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 BTN3A1O00481 513 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 PREPP48147 710 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 ZNF658BQ4V348 819 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms