RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ELOVL7A1L3X0 281 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CAPN8A6NHC0 703 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 C1QTNF3-AMACRE9PGA6 284 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 RPL7P18124 248 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 SLC6A6P31641 620 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 RPL38P63173 70 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 TRAM1Q15629 374 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TMEM69Q5SWH9 247 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CYP4V2Q6ZWL3 525 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 PARGQ86W56 976 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CPVLQ9H3G5 476 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SPON1Q9HCB6 807 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PLAGL2Q9UPG8 496 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 COLEC10Q9Y6Z7 277 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ADGRL1O94910 1474 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 WEE1P30291 646 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 THBS3P49746 956 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ZNF136P52737 540 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TBX4P57082 545 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TAS2R43P59537 309 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TIGD2Q4W5G0 525 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 GCNT6Q5T4J0 391 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 NEPROQ6NW34 567 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 BAIAP2L2Q6UXY1 529 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PRR22Q8IZ63 422 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 GALNT11Q8NCW6 608 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FCAMRQ8WWV6 532 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 GDF3Q9NR23 364 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 MGAT4CQ9UBM8 478 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ADAM18Q9Y3Q7 739 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CDH10Q9Y6N8 788 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 A0A1B0GVM2 712 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SLC12A8A0AV02 714 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TCAF2A6NFQ2 919 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 AURKAO14965 403 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CHADO15335 359 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FLRT2O43155 660 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SSR2P43308 183 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 GRIA4P48058 902 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 HABP2Q14520 560 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 IQCCQ4KMZ1 466 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FBXO33Q7Z6M2 555 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CREG2Q8IUH2 290 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 DAZAP1Q96EP5 407 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 PSD2Q9BQI7 771 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 XPNPEP1Q9NQW7 623 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 POLE4Q9NR33 117 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ZNF282Q9UDV7 671 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 KIR3DL1P43629 444 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.82□□□□□ -14e-7■■■□□ 17.3
NIPBL-202ENST00000448238 SLC22A15Q8IZD6 547 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 MFSD14AQ96MC6 490 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 GLT1D1Q96MS3 346 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 FN3KRPQ9HA64 309 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 GPR89AB7ZAQ6 455 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 NRP2O60462 931 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 TRBC1P01850 177 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 GPR89BP0CG08 455 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ENDOUP21128 410 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 KLRC1P26715 233 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 PPP2CAP67775 309 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 HSPA14Q0VDF9 509 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ARHGAP11AQ6P4F7 1023 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 C17orf64Q86WR6 236 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 RPLP0P6Q8NHW5 317 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 RTCAO00442 366 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 ZNF207O43670 478 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 ZMPSTE24O75844 475 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 IL3P08700 152 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 TSHRP16473 764 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CD72P21854 359 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 GNRHRP30968 328 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 PNLIPRP1P54315 467 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 PSPHP78330 225 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 SEMA5AQ13591 1074 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZNF169Q14929 603 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 PTCHD3Q3KNS1 767 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 LIN52Q52LA3 116 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 KLHDC7AQ5VTJ3 777 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 NIPAL1Q6NVV3 410 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 EFCAB12Q6NXP0 572 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 PTCHD1Q96NR3 888 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 CRTAC1Q9NQ79 661 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 SLC2A8Q9NY64 477 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 COPZ2Q9P299 210 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 KDM5DQ9BY66 1539 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZSCAN5DPP0CG00 497 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 RAB3BP20337 219 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ABCG1P45844 678 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 VSX2P58304 361 aaPredicted RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 GPR157Q5UAW9 335 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 KCNT2Q6UVM3 1135 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 SLC41A1Q8IVJ1 513 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 RDH10Q8IZV5 341 aa8.82□□□□□ -1
NIPBL-202ENST00000448238 ZCCHC9Q8N567 271 aaKnown RBP8.82□□□□□ -1
NIPBL-202ENST00000448238 C3orf58Q8NDZ4 430 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms