RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NIPSNAP2O75323 286 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 UBXN7O94888 489 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 PROS1P07225 676 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 HGFP14210 728 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 AMD1P17707 334 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 CCR7P32248 378 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 EPHA4P54764 986 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 GFERP55789 205 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 CFHR1Q03591 330 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 CYP4F3Q08477 520 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 HSPA14Q0VDF9 509 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 TRADDQ15628 312 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 HSP90AA5PQ58FG0 334 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 SPANXN3Q5MJ09 141 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 DUPD1Q68J44 220 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 UNC5AQ6ZN44 842 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 ZNF574Q6ZN55 896 aaPredicted RBP11.64□□□□□ -0.55
RFC4-208ENST00000447345 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 CENPUQ71F23 418 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 SLITRK4Q8IW52 837 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 ZCCHC14Q8WYQ9 949 aaKnown RBP11.64□□□□□ -0.55
RFC4-208ENST00000447345 TMEM74Q96NL1 305 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 FAM167BQ9BTA0 163 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 LRRC1Q9BTT6 524 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 HGH1Q9BTY7 390 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 STRADBQ9C0K7 418 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 PPANQ9NQ55 473 aaKnown RBP11.64□□□□□ -0.55
RFC4-208ENST00000447345 OGFRQ9NZT2 677 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 WHRNQ9P202 907 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 TEX264Q9Y6I9 313 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 APC2O95996 2303 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CCDC187A0A096LP49 1063 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 IGHV5-10-1A0A0J9YXX1 117 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 A0A1W2PNU3 283 aaPredicted RBP11.63□□□□□ -0.55
RFC4-208ENST00000447345 NDC80O14777 642 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 BRINP1O60477 761 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 TTC4O95801 387 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 TUBB4AP04350 444 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 GSTM1P09488 218 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 RPS3P23396 243 aaKnown RBP eCLIP11.63□□□□□ -0.553e-9■■□□□ 11.4
RFC4-208ENST00000447345 CCKBRP32239 447 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 ABCG1P45844 678 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 PPP1CAP62136 330 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 GSTM4Q03013 218 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 C16orf72Q14CZ0 275 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 TMED2Q15363 201 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CAPRIN2Q6IMN6 1127 aaKnown RBP11.63□□□□□ -0.55
RFC4-208ENST00000447345 CCDC25Q86WR0 208 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 LRRC6Q86X45 466 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 VRK3Q8IV63 474 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 SPNS2Q8IVW8 549 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 ZBED8Q8IZ13 594 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CACTIN-AS1Q8N1I8 211 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
RFC4-208ENST00000447345 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 FBXO36Q8NEA4 188 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 TMEM159Q96B96 161 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CERS2Q96G23 380 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 TGM7Q96PF1 710 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 PANX3Q96QZ0 392 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 NRTNQ99748 197 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 NAT9Q9BTE0 207 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CARD6Q9BX69 1037 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
RFC4-208ENST00000447345 PLAC1Q9HBJ0 212 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 SAYSD1Q9NPB0 183 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 LOXL2Q9Y4K0 774 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 ACACAQ13085 2346 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 FREM2Q5SZK8 3169 aa11.63□□□□□ -0.55
RFC4-208ENST00000447345 USP24Q9UPU5 2620 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 SLC5A10A0PJK1 596 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 BHMG1C9JSJ3 638 aaPredicted RBP11.62□□□□□ -0.55
RFC4-208ENST00000447345 E5RI56 91 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 APOA4P06727 396 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 CTAGE8P0CG41 777 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 THRAP10827 490 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 ITIH1P19827 911 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 CAPZBP47756 277 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 LEPRP48357 1165 aaKnown RBP11.62□□□□□ -0.55
RFC4-208ENST00000447345 CARSP49589 748 aaKnown RBP11.62□□□□□ -0.55
RFC4-208ENST00000447345 LIMK2P53671 638 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 PLTPP55058 493 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 RPA4Q13156 261 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 PRKG2Q13237 762 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 TMEM71Q6P5X7 295 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 TRMT10BQ6PF06 316 aaKnown RBP11.62□□□□□ -0.55
RFC4-208ENST00000447345 CNSTQ6PJW8 725 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 FAM92BQ6ZTR7 304 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 RAB11FIP2Q7L804 512 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 OTOAQ7RTW8 1153 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 CTAGE4Q8IX94 777 aa11.62□□□□□ -0.55
RFC4-208ENST00000447345 RBM12BQ8IXT5 1001 aaKnown RBP11.62□□□□□ -0.55
RFC4-208ENST00000447345 MNS1Q8NEH6 495 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms