RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 DFNA5O60443 496 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 RFPL1O75677 317 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 WISP3O95389 354 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 C2P06681 752 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 ANXA6P08133 673 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLC35E2BP0CK96 405 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 KRT15P19012 456 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 MAGEA12P43365 314 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 IRF9Q00978 393 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 CSRP2Q16527 193 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 TTLL9Q3SXZ7 439 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 ASCL5Q7RTU5 278 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 KANSL1Q7Z3B3 1105 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 GKN2Q86XP6 184 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 SPATA6LQ8N4H0 392 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 FAM46DQ8NEK8 389 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 SAP25Q8TEE9 199 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 GLMNQ92990 594 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 MTBPQ96DY7 904 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 LINGO1Q96FE5 620 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 UNKQ9C0B0 810 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 VPS11Q9H270 941 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 OR52A5Q9H2C5 316 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 POPDC3Q9HBV1 291 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 SCHIP1Q9P0W5 487 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 KLHL42Q9P2K6 505 aa17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 RUVBL2Q9Y230 463 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-203ENST00000447216 RIF1Q5UIP0 2472 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 DNAH14Q0VDD8 3507 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 A0A096LPK6 155 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 B4DGG1 531 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 LMO7DNF2Z398 122 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 GOLGA8RI6L899 631 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 AGPSO00116 658 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 DYNC1I1O14576 645 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 YKT6O15498 198 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 LRP3O75074 770 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLCO2B1O94956 709 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 MT-ND3P03897 115 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 BRAFP15056 766 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 ZNF37AP17032 561 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 TGM1P22735 817 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 CRABP2P29373 138 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 CSRP3P50461 194 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 ABRQ12979 859 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 TIFABQ6ZNK6 161 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 PIWIL4Q7Z3Z4 852 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLC22A15Q8IZD6 547 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 SKA2Q8WVK7 121 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 PATE1Q8WXA2 126 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 ISL2Q96A47 359 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 EDEM2Q9BV94 578 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 SIRPGQ9P1W8 387 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 ACSL5Q9ULC5 683 aa17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 CFAP20Q9Y6A4 193 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 ZFHX2Q9C0A1 2572 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-203ENST00000447216 A6NCN8 305 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 MAP2K7O14733 419 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 TSPAN12O95859 305 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 TOP3BO95985 862 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 SLC35G4P0C7Q5 338 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 CCDC166P0CW27 439 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 GIMD1P0DJR0 217 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 PYGBP11216 843 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 IL2P60568 153 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 DLG1Q12959 904 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 RPA4Q13156 261 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 DNAJC3Q13217 504 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 CLCA4Q14CN2 919 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 TAF1BQ53T94 588 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 DUS1LQ6P1R4 473 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 PRR23CQ6ZRP0 262 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 ZDHHC1Q8WTX9 485 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 KCTD4Q8WVF5 259 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 INSM2Q96T92 566 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 DPEP2Q9H4A9 486 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 VIPAS39Q9H9C1 493 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 PCMTD2Q9NV79 361 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 TLK1Q9UKI8 766 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 IKZF3Q9UKT9 509 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 CSNK1G3Q9Y6M4 447 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 FAM186AA6NE01 2351 aa17.59■□□□□ 0.41
TRAPPC4-203ENST00000447216 OR52A4PA6NMU1 304 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CDX4O14627 284 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 MPOP05164 745 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CBSLP0DN79 551 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CBSP35520 551 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 RGS4P49798 205 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CSHL1Q14406 222 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 UAP1L1Q3KQV9 507 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 AASDHQ4L235 1098 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 AGAP9Q5VTM2 703 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CAPRIN2Q6IMN6 1127 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 TRABD2AQ86V40 505 aa17.58■□□□□ 0.4
TRAPPC4-203ENST00000447216 NKAPQ8N5F7 415 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms