RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ABHD11Q8NFV4 315 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 FBXO30Q8TB52 745 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 ACTR8Q9H981 624 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 SCUBE2Q9NQ36 999 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 ENPP5Q9UJA9 477 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 AP3M1Q9Y2T2 418 aa18.77■□□□□ 0.6
SDCBP-204ENST00000447182 BCAS1O75363 584 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 HOXB6P17509 224 aaKnown RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 AKT1P31749 480 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 IST1P53990 364 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 FKBP1BP68106 108 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 KCNAB2Q13303 367 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 AAK1Q2M2I8 961 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 DPY19L1Q2PZI1 675 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ZRANB3Q5FWF4 1079 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 LAIR2Q6ISS4 152 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 SBSNQ6UWP8 590 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 LINC00299Q6ZSB3 139 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 IGFN1Q86VF2 1251 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ANKRD13BQ86YJ7 626 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 GLB1L3Q8NCI6 653 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 OR10A6Q8NH74 314 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 NUDT8Q8WV74 236 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ZBTB18Q99592 522 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 SH3GL1Q99961 368 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 P2RY12Q9H244 342 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 SELENONQ9NZV5 590 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 LIMD1Q9UGP4 676 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 C3orf18Q9UK00 162 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 PAIP2BQ9ULR5 123 aaKnown RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 DHRS7Q9Y394 339 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ELOVL7A1L3X0 281 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 TMEM221A6NGB7 291 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ANKRD66B4E2M5 251 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 RETP07949 1114 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ARL1P40616 181 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 CCR3P51677 355 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ISL1P61371 349 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 MAD2L1Q13257 205 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 AQP6Q13520 282 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ATP1A4Q13733 1029 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 SPCS2Q15005 226 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 IMPG1Q17R60 797 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 CRTC3Q6UUV7 619 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 FRA10AC1Q70Z53 315 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 RBM23Q86U06 439 aaKnown RBP18.76■□□□□ 0.59
SDCBP-204ENST00000447182 STK40Q8N2I9 435 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 TTC30BQ8N4P2 665 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 LPCAT1Q8NF37 534 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 ITPKCQ96DU7 683 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 CCDC138Q96M89 665 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 SMIM14Q96QK8 99 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 HBEGFQ99075 208 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 NEURL2Q9BR09 285 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 MAGIXQ9H6Y5 334 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 BAG5Q9UL15 447 aa18.76■□□□□ 0.59
SDCBP-204ENST00000447182 LOC100130705A0A1B0GUX0 176 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 STX7O15400 261 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 NOBOXO60393 691 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 F11P03951 625 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 CNPP09543 421 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 IL1RNP18510 177 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 PCMT1P22061 227 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 HTR1BP28222 390 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 SLC6A4P31645 630 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 RYKP34925 604 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 NRIP1P48552 1158 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 CDH4P55283 916 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 OXCT1P55809 520 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 IL18R1Q13478 541 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 VARS2Q5ST30 1063 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 ADHFE1Q8IWW8 467 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 TRPV1Q8NER1 839 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 OR5K1Q8NHB7 308 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 FBLIM1Q8WUP2 373 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 POP5Q969H6 163 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 ZNF566Q969W8 418 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 RHBDF1Q96CC6 855 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 BCL7BQ9BQE9 202 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 THUMPD3Q9BV44 507 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 ADGRE3Q9BY15 652 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 WARS2Q9UGM6 360 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 DOLKQ9UPQ8 538 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 EIF3LQ9Y262 564 aaKnown RBP18.75■□□□□ 0.59
SDCBP-204ENST00000447182 PCDHGB1Q9Y5G3 927 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 RAI2Q9Y5P3 530 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 SNX5Q9Y5X3 404 aa18.75■□□□□ 0.59
SDCBP-204ENST00000447182 H3BNC9 293 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CXCR6O00574 342 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 GNGT2O14610 69 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SYN3O14994 580 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SLC16A6O15403 523 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CCDC159P0C7I6 412 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ZDHHC11BP0C7U3 371 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SLC2A4P14672 509 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CDH3P22223 829 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 KCNQ1P51787 676 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ITGADQ13349 1161 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 MAPKAPK3Q16644 382 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 C18orf21Q32NC0 220 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms