RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 IL27RAQ6UWB1 636 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 HACD2Q6Y1H2 254 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 DHDDSQ86SQ9 333 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 TRAM1L1Q8N609 369 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 BEND7Q8N7W2 519 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 DCUN1D1Q96GG9 259 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 FAM83CQ9BQN1 747 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 MAP10Q9P2G4 905 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 EIF3FO00303 357 aaPredicted RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 TRIM38O00635 465 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ACOT8O14734 319 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 NUAK1O60285 661 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 FCARP24071 287 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ZFP36L2P47974 494 aaKnown RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 ERVK-8P63133 956 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ABRAXAS2Q15018 415 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 RPS6KA2Q15349 733 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ZXDCQ2QGD7 858 aaPredicted RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 LIPIQ6XZB0 460 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 MILR1Q7Z6M3 343 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 SFRP1Q8N474 314 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 DDHD1Q8NEL9 900 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 LRCH3Q96II8 777 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 CCT7Q99832 543 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ZSCAN5AQ9BUG6 496 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 BRINP2Q9C0B6 783 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 RIC8BQ9NVN3 520 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 DEC1Q9P2X7 70 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 DENND4AQ7Z401 1863 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 BBIP1A8MTZ0 92 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 K7EPI3 171 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ELFN1P0C7U0 828 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ATP6V1C1P21283 382 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 NFKBIAP25963 317 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 RPIAP49247 311 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 MRPL19P49406 292 aaKnown RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 FNDC3BQ53EP0 1204 aaKnown RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 BLOC1S3Q6QNY0 202 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 UBE2R2Q712K3 238 aaPredicted RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 RSRC1Q96IZ7 334 aaKnown RBP17.11■□□□□ 0.33
SMC6-206ENST00000446852 SPAG4Q9NPE6 437 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 PFDN4Q9NQP4 134 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 ARL15Q9NXU5 204 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 CROTQ9UKG9 612 aa17.11■□□□□ 0.33
SMC6-206ENST00000446852 PRORSD1PA6NEY8 169 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 OR2AG2A6NM03 316 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 BCAS2O75934 225 aaPredicted RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 BHLHE22Q8NFJ8 381 aaPredicted RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 SKA2Q8WVK7 121 aaPredicted RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 ASB11Q8WXH4 323 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 WRAP53Q9BUR4 548 aaKnown RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 ANGPTL3Q9Y5C1 460 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 KRT87PA6NCN2 255 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 MAP3K7O43318 606 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 UFM1P61960 85 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 MRPS22P82650 360 aaKnown RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 HNRNPA1L2Q32P51 320 aaKnown RBP17.1■□□□□ 0.33
SMC6-206ENST00000446852 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 CMPK2Q5EBM0 449 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 ERAP2Q6P179 960 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 ROPN1LQ96C74 230 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 SLC12A9Q9BXP2 914 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 TMEM181Q9P2C4 612 aa17.1■□□□□ 0.33
SMC6-206ENST00000446852 ANTXRLA6NF34 631 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 TMEM202A6NGA9 273 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 CFAP99D6REC4 459 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 LSM1O15116 133 aaKnown RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 SYNCRIPO60506 623 aaKnown RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 STK16O75716 305 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ANXA5P08758 320 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ACADSP16219 412 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 MSH3P20585 1137 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 HMOX2P30519 316 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PIK3CGP48736 1102 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 RCAN2Q14206 197 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ACOX1Q15067 660 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ZNF284Q2VY69 593 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PLEKHS1Q5SXH7 462 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PCYOX1LQ8NBM8 494 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ELMO1Q92556 727 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 IL1RL2Q9HB29 575 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PARVBQ9HBI1 364 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 SUCOQ9UBS9 1254 aaKnown RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 CD300AQ9UGN4 299 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 NDUFAF1Q9Y375 327 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 RNF11Q9Y3C5 154 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ASPDHA6ND91 283 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 FXYD1O00168 92 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 FFAR3O14843 346 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ANGPT2O15123 496 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 GPR42O15529 346 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms