RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PRAMEF14Q5SWL7 426 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 WASH2PQ6VEQ5 465 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
CCNE1-203ENST00000444983 ISCA2Q86U28 154 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 SPATA6LQ8N4H0 392 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 GOLGA6L1Q8N7Z2 621 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 KCTD4Q8WVF5 259 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 ALKBH8Q96BT7 664 aaKnown RBP14.8□□□□□ -0.04
CCNE1-203ENST00000444983 NXNL1Q96CM4 212 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 LINGO1Q96FE5 620 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 ARRDC1-AS1Q9H2J1 176 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 WASH6PQ9NQA3 447 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 ZNF358Q9NW07 568 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 APOBEC3BQ9UH17 382 aaKnown RBP14.8□□□□□ -0.04
CCNE1-203ENST00000444983 DCDC2Q9UHG0 476 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 IKZF3Q9UKT9 509 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 SLC6A14Q9UN76 642 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 KCNK6Q9Y257 313 aa14.8□□□□□ -0.04
CCNE1-203ENST00000444983 ARHGEF17Q96PE2 2063 aaPredicted RBP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 ADAMTS9Q9P2N4 1935 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 CABIN1Q9Y6J0 2220 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 CELA2BP08218 269 aaPredicted RBP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 MPC1LP0DKB6 136 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 BRAFP15056 766 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 MPLP40238 635 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 NBL1P41271 181 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 RGS4P49798 205 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 HNRNPKP61978 463 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 GRIK2Q13002 908 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 CSHL1Q14406 222 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 TRIM61Q5EBN2 209 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 AGAP9Q5VTM2 703 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 CAPRIN2Q6IMN6 1127 aaKnown RBP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 LRRC8EQ6NSJ5 796 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 ABRAXAS1Q6UWZ7 409 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 PIWIL4Q7Z3Z4 852 aaKnown RBP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 APOPT1Q96IL0 206 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 SMC6Q96SB8 1091 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 ELF4Q99607 663 aaPredicted RBP14.79□□□□□ -0.04
CCNE1-203ENST00000444983 FAM8A1Q9UBU6 413 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 TBC1D29Q9UFV1 150 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 WDR37Q9Y2I8 494 aa14.79□□□□□ -0.04
CCNE1-203ENST00000444983 H3BM21 787 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 H3BQF6 201 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 GFYI3L273 518 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 EML2O95834 649 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 IDSP22304 550 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 CCT5P48643 541 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 SLC18A1P54219 525 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 ATP6V0D1P61421 351 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 ILF3Q12906 894 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCNE1-203ENST00000444983 MPP2Q14168 576 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 ACAP2Q15057 778 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 FAM83EQ2M2I3 478 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 SYTL3Q4VX76 610 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 PRRT3Q5FWE3 981 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 SDR16C5Q8N3Y7 309 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
CCNE1-203ENST00000444983 ASB11Q8WXH4 323 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 PTERQ96BW5 349 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 GSDMCQ9BYG8 508 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 IRF2BPLQ9H1B7 796 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 NMRAL1Q9HBL8 299 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 FAM53CQ9NYF3 392 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 TMEM216Q9P0N5 145 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 EMCNQ9ULC0 261 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 RAB23Q9ULC3 237 aa14.78□□□□□ -0.04
CCNE1-203ENST00000444983 RUVBL2Q9Y230 463 aaKnown RBP14.78□□□□□ -0.04
CCNE1-203ENST00000444983 CCDC189A1A4V9 331 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 TARM1B6A8C7 271 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 ARHGAP33O14559 1287 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 COPEO14579 308 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCNE1-203ENST00000444983 ZBTB14O43829 449 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 GLRA3O75311 464 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 PIAS2O75928 621 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 CFIP05156 583 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 RETP07949 1114 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 SBK3P0C264 359 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 CTSEP14091 401 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 RPL10P27635 214 aaKnown RBP14.77□□□□□ -0.04
CCNE1-203ENST00000444983 KCNC1P48547 511 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 IRX4P78413 519 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 TSNAXIP1Q2TAA8 658 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 HLA-BQ31612 363 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 UAP1L1Q3KQV9 507 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 SBSNQ6UWP8 590 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 KANSL1Q7Z3B3 1105 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 PDZD3Q86UT5 571 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 FSTL5Q8N475 847 aaPredicted RBP14.77□□□□□ -0.04
CCNE1-203ENST00000444983 ZNF548Q8NEK5 533 aaPredicted RBP14.77□□□□□ -0.04
CCNE1-203ENST00000444983 RHEBL1Q8TAI7 183 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 DLG3Q92796 817 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 KIAA1191Q96A73 305 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 TFB2MQ9H5Q4 396 aaKnown RBP14.77□□□□□ -0.04
CCNE1-203ENST00000444983 FSCN3Q9NQT6 498 aa14.77□□□□□ -0.04
CCNE1-203ENST00000444983 PRDM8Q9NQV8 689 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms