RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FERD3LQ96RJ6 166 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 LRRN3Q9H3W5 708 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MVB12BQ9H7P6 319 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 UCK1Q9HA47 277 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MOCS1Q9NZB8 636 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 TRMT6Q9UJA5 497 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 NFU1Q9UMS0 254 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 ASF1AQ9Y294 204 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 ARID1BQ8NFD5 2236 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 ZFC3H1O60293 1989 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 LILRA5A6NI73 299 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 PRR19A6NJB7 356 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 PPM1DO15297 605 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 BRAFP15056 766 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 AOAHP28039 575 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CCR7P32248 378 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 SLC19A1P41440 591 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 MAPK9P45984 424 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 RGS4P49798 205 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 UBE2IP63279 158 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 NAB1Q13506 487 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 HES3Q5TGS1 186 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 LRRC8EQ6NSJ5 796 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 ARMC6Q6NXE6 501 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 TRMT10BQ6PF06 316 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 TMEM26Q6ZUK4 368 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 ZNF438Q7Z4V0 828 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 PIM3Q86V86 326 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 RAB42Q8N4Z0 105 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 ZBTB2Q8N680 514 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 GPATCH11Q8N954 259 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.78□□□□□ -0.29e-10■■■■■ 79.8
SSBP3-208ENST00000444533 GRAMD1AQ96CP6 724 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 BIRC8Q96P09 236 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CPNE1Q99829 537 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 WDR83Q9BRX9 315 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 AKAP7Q9P0M2 348 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 KLHL42Q9P2K6 505 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CLCA2Q9UQC9 943 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 CFAP20Q9Y6A4 193 aaKnown RBP13.78□□□□□ -0.2
SSBP3-208ENST00000444533 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
SSBP3-208ENST00000444533 DNAH14Q0VDD8 3507 aa13.77□□□□□ -0.2
SSBP3-208ENST00000444533 TCRBV9S1A1TA0A576 114 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 CNOT1A5YKK6 2376 aaKnown RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 CPNE6O95741 557 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 AHSGP02765 367 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 OR1D5P58170 312 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 CCL7P80098 99 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 BPTFQ12830 3046 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 PDAP1Q13442 181 aaKnown RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 NR1D2Q14995 579 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 FAM45BPQ6NSW5 357 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 CNSTQ6PJW8 725 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 RELL1Q8IUW5 271 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 SFTPA2Q8IWL1 248 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 SLC22A15Q8IZD6 547 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 LILRA3Q8N6C8 439 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 ACVR1CQ8NER5 493 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 FAM45AQ8TCE6 357 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 INPP5DQ92835 1189 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 FAM136AQ96C01 138 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 TMEM74Q96NL1 305 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 ARHGEF17Q96PE2 2063 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 INSM2Q96T92 566 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 STRADBQ9C0K7 418 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 OR52A5Q9H2C5 316 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 LRRC4CQ9HCJ2 640 aa13.77□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF624Q9P2J8 865 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-208ENST00000444533 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 UBXN7O94888 489 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 DKK1O94907 266 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 SLCO2B1O94956 709 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 MT-CO3P00414 261 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 CBSLP0DN79 551 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ENO3P13929 434 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 PDHA2P29803 388 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ATP5DP30049 168 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 CBSP35520 551 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 GP5P40197 560 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-208ENST00000444533 PRKAA1Q13131 559 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 GPR18Q14330 331 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 KYNUQ16719 465 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF789Q5FWF6 425 aa13.76□□□□□ -0.21
SSBP3-208ENST00000444533 UNC5DQ6UXZ4 953 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms