RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZFPM2Q8WW38 1151 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 LPGAT1Q92604 370 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 FAM167BQ9BTA0 163 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 SEMA6CQ9H3T2 930 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 POLR1BQ9H9Y6 1135 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 INTS10Q9NVR2 710 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 AKAP7Q9P0M2 348 aaPredicted RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZC3H7BQ9UGR2 993 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 CHMP2BQ9UQN3 213 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 MRFAP1Q9Y605 127 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 IGHV5-10-1A0A0J9YXX1 117 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 H3BMM5 538 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 ESR1P03372 595 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 MPOP05164 745 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 APOA4P06727 396 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 TYRP1P17643 537 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 FMO4P31512 558 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 LSSP48449 732 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 TRA2AQ13595 282 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 HP1BP3Q5SSJ5 553 aaPredicted RBP17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 DUPD1Q68J44 220 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 KLHL35Q6PF15 583 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 FOXR1Q6PIV2 292 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 NAPRTQ6XQN6 538 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 CENPUQ71F23 418 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 RAB11FIP2Q7L804 512 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 KCNMB4Q86W47 210 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 PLXDC1Q8IUK5 500 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 KRT222Q8N1A0 295 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 ASZ1Q8WWH4 475 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZCCHC14Q8WYQ9 949 aaKnown RBP17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 CFAP36Q96G28 342 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCDC74BQ96LY2 380 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 FERD3LQ96RJ6 166 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 CRYL1Q9Y2S2 319 aa17.04■□□□□ 0.32
SMARCAL1-209ENST00000444508 SLC5A10A0PJK1 596 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 KPNA5O15131 536 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 TP73O15350 636 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 HOXB3P14651 431 aaPredicted RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 MPSTP25325 297 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 RBMS1P29558 406 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCR7P32248 378 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 SLC1A2P43004 574 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CAPZBP47756 277 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CSE1LP55060 971 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 ADARP55265 1226 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CFHR1Q03591 330 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 HSPA14Q0VDF9 509 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZNF574Q6ZN55 896 aaPredicted RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 IGDCC3Q8IVU1 814 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 FBXO39Q8N4B4 442 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 GSDMBQ8TAX9 411 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 LKAAEAR1Q8TD35 194 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CMKLR1Q99788 373 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCDC68Q9H2F9 335 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 KIR3DX1Q9H7L2 352 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 MVB12BQ9H7P6 319 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 IARS2Q9NSE4 1012 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 DKK4Q9UBT3 224 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 SLC24A2Q9UI40 661 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 LOXL2Q9Y4K0 774 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 ASPMQ8IZT6 3477 aa17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 MAP1BP46821 2468 aaKnown RBP17.03■□□□□ 0.32
SMARCAL1-209ENST00000444508 KIF26BQ2KJY2 2108 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTAGE15A4D2H0 777 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 PLD2O14939 933 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 HGSO14964 777 aaPredicted RBP17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 BRINP1O60477 761 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 S1PR4O95977 384 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 JMJD7P0C870 316 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTAGE8P0CG41 777 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 THRAP10827 490 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 AOAHP28039 575 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CAV1Q03135 178 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTBP1Q13363 440 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTSL3PQ5NE16 218 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 SNAP47Q5SQN1 464 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 UNC5AQ6ZN44 842 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 OTOAQ7RTW8 1153 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTAGE6Q86UF2 777 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 CTAGE4Q8IX94 777 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 UNC5BQ8IZJ1 945 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 KDF1Q8NAX2 398 aaPredicted RBP17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 RCBTB1Q8NDN9 531 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 JPH3Q8WXH2 748 aaPredicted RBP17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 BIRC8Q96P09 236 aa17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 PPANQ9NQ55 473 aaKnown RBP17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 FBXO6Q9NRD1 293 aaPredicted RBP17.02■□□□□ 0.32
SMARCAL1-209ENST00000444508 OGFRQ9NZT2 677 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms