RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CHRNB3Q05901 458 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 STX4Q12846 297 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 EML3Q32P44 896 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 RIPOR1Q6ZS17 1223 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ADGRG2Q8IZP9 1017 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SMPDL3AQ92484 453 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ESAMQ96AP7 390 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 PLEKHA8Q96JA3 519 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 FETUBQ9UGM5 382 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 C15orf38-AP3S2A0A0A6YYH1 394 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SRRM3A6NNA2 597 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 NUDT14O95848 222 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 AHSGP02765 367 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 PKNOX1P55347 436 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 STXBP1P61764 594 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 C1orf61Q13536 156 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CCNYL2Q5T2Q4 361 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ARPINQ7Z6K5 226 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SNX32Q86XE0 403 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CILP2Q8IUL8 1156 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CLEC4FQ8N1N0 589 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 C1orf50Q9BV19 199 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 PIF1Q9H611 641 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM216Q9P0N5 145 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 APOBEC3BQ9UH17 382 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 PCDHGA11Q9Y5H2 935 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CLDN4O14493 209 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 PLIN3O60664 434 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 LYPLA1O75608 230 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 KLKB1P03952 638 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 HNRNPA2B1P22626 353 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 HMGCLP35914 325 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 GPR180Q86V85 440 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ARFGAP1Q8N6T3 406 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ZCCHC10Q8TBK6 192 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ELSPBP1Q96BH3 223 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM109Q9BVC6 243 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 VEGFDO43915 354 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 EPORP19235 508 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ITGB7P26010 798 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ZC3HC1Q86WB0 502 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 MAGEA13PA6NCF6 341 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 PRR5-ARHGAP8B1AHC4 643 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 TPST1O60507 370 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 ECI2O75521 394 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 HNRNPKP61978 463 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 PRMT9Q6P2P2 845 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 CYP4Z1Q86W10 505 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM145Q8NBT3 493 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 PPCDCQ96CD2 204 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 RGSL1A5PLK6 1076 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 FAM159BA6NKW6 160 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 THEGLP0DJG4 465 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 CTHP32929 405 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 BUD31P41223 144 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 MAPKAPK3Q16644 382 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 OR4E2Q8NGC2 313 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 MAPK15Q8TD08 544 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 CENPTQ96BT3 561 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 SORCS3Q9UPU3 1222 aa13.86□□□□□ -0.19
SMARCA4-204ENST00000444061 OR5K4A6NMS3 321 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PSMA4P25789 261 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 SPINT3P49223 89 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PCYT1AP49585 367 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 DCUN1D3Q8IWE4 304 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 OR2T34Q8NGX1 318 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 NCSTNQ92542 709 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 CAAP1Q9H8G2 361 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TMCC3Q9ULS5 477 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 K7EPI3 171 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 LINC01565O15544 149 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 MSS51Q4VC12 460 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PRAMEF13Q5VWM6 474 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 POU5F2Q8N7G0 328 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TSSK3Q96PN8 268 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 KCTD14Q9BQ13 255 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 LRTM1Q9HBL6 345 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TRIM39Q9HCM9 518 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 CACNG3O60359 315 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 ITGB8P26012 769 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 EPHA3P29320 983 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 CSTF2P33240 577 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 HNMTP50135 292 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 LSM12Q3MHD2 195 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 CNTD1Q8N815 330 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 Q8N9G6 341 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PYCR2Q96C36 320 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TOE1Q96GM8 510 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 NAF1Q96HR8 494 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms