RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ZNF517Q6ZMY9 492 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 DET1Q7L5Y6 550 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 CFAP206Q8IYR0 622 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 COL26A1Q96A83 441 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 ZNF501Q96CX3 271 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 MRFAP1L1Q96HT8 127 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 MVB12BQ9H7P6 319 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 ZDHHC3Q9NYG2 299 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 MAN2B2Q9Y2E5 1009 aa15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 ZNF106Q9H2Y7 1883 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-204ENST00000443891 TRBV5-4A0A0C4DH59 114 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 MACROD2A1Z1Q3 448 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 CDC14CA4D256 554 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 OR6C74A6NCV1 312 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 IFRD1O00458 451 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 SCRG1O75711 98 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 TIAF1O95411 115 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 RAB40ALP0C0E4 278 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 SEMA5AQ13591 1074 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 PARP6Q2NL67 630 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 P3H1Q32P28 736 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 ATP1A1-AS1Q5TC04 95 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 IZUMO3Q5VZ72 239 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 DENND5AQ6IQ26 1287 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 TMEM126BQ8IUX1 230 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 TEX19Q8NA77 164 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 CPT1BQ92523 772 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 RMDN2Q96LZ7 410 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 ACTL8Q9H568 366 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 TFB2MQ9H5Q4 396 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 LRRC40Q9H9A6 602 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 POMT2Q9UKY4 750 aa15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 FARSAQ9Y285 508 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 CFAP20Q9Y6A4 193 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-204ENST00000443891 MIF4GDA9UHW6 222 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 LDB2O43679 373 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 AP2A2O94973 939 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 FURINP09958 794 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 CDH3P22223 829 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 ACRV1P26436 265 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 KPNA2P52292 529 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 KCNAB1Q14722 419 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 KCTD11Q693B1 232 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 SYCE1Q8N0S2 351 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 UBL4BQ8N7F7 174 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 OR13C4Q8NGS5 318 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 CCDC110Q8TBZ0 833 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 LCN9Q8WX39 176 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 DPH2Q9BQC3 489 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 APOL2Q9BQE5 337 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 OR52A5Q9H2C5 316 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 SRMSQ9H3Y6 488 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 C10orf88Q9H8K7 445 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 COG4Q9H9E3 785 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 TP53TG5Q9Y2B4 290 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 PCDHGB7Q9Y5F8 929 aa15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 PCDHGA9Q9Y5G4 932 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-204ENST00000443891 NTRK1P04629 796 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 POLBP06746 335 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 PSMA3P25788 255 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 MC4RP32245 332 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 CD97P48960 835 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 VAV2P52735 878 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 PLOD1Q02809 727 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 ZNF658BQ4V348 819 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 ARHGEF18Q6ZSZ5 1173 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 ASB18Q6ZVZ8 466 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 HPS6Q86YV9 775 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 LRRC57Q8N9N7 239 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 OR4E2Q8NGC2 313 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 PITPNM3Q9BZ71 974 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 SOHLH2Q9NX45 425 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 TLK1Q9UKI8 766 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 AMFRQ9UKV5 643 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 TFR2Q9UP52 801 aa15.87■□□□□ 0.13
CTDSP1-204ENST00000443891 RCCD1A6NED2 376 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 SOWAHDA6NJG2 315 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 F8W8V4 182 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 LIN7AO14910 233 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 HBQ1P09105 142 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 POLR2CP19387 275 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 NSG1P42857 185 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 CACNG1Q06432 222 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 LAMB3Q13751 1172 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 UBAP2LQ14157 1087 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 ITIH4Q14624 930 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 COLEC12Q5KU26 742 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 DUS1LQ6P1R4 473 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 LINC00523Q86TU6 105 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 ATCAYQ86WG3 371 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 ALG3Q92685 438 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 MR1Q95460 341 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 CDKN2AIPNLQ96HQ2 116 aa15.86■□□□□ 0.13
CTDSP1-204ENST00000443891 ALS2CR12Q96Q35 445 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms