RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 IMPACTQ9P2X3 320 aa16.38■□□□□ 0.21
COL16A1-204ENST00000440437 PCDHGA6Q9Y5G7 932 aa16.38■□□□□ 0.21
COL16A1-204ENST00000440437 HEBP2Q9Y5Z4 205 aa16.38■□□□□ 0.21
COL16A1-204ENST00000440437 SPTA1P02549 2419 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 UBA6A0AVT1 1052 aaPredicted RBP16.37■□□□□ 0.21
COL16A1-204ENST00000440437 OR6C74A6NCV1 312 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 WISP1O95388 367 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 MT-ND3P03897 115 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
COL16A1-204ENST00000440437 TPH1P17752 444 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 HSD11B2P80365 405 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 GSE1Q14687 1217 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 POU6F1Q14863 301 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 DEFB109BQ30KR1 87 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 ZRANB3Q5FWF4 1079 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 C16orf46Q6P387 395 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 BPHLQ86WA6 291 aaPredicted RBP16.37■□□□□ 0.21
COL16A1-204ENST00000440437 PIANPQ8IYJ0 282 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 STYXQ8WUJ0 223 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 APOBEC4Q8WW27 367 aaKnown RBP16.37■□□□□ 0.21
COL16A1-204ENST00000440437 CDKN2AIPNLQ96HQ2 116 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 PPM1MQ96MI6 270 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 TRIM4Q9C037 500 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 FGF21Q9NSA1 209 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 PIH1D1Q9NWS0 290 aaKnown RBP16.37■□□□□ 0.21
COL16A1-204ENST00000440437 POMT2Q9UKY4 750 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 COLEC10Q9Y6Z7 277 aa16.37■□□□□ 0.21
COL16A1-204ENST00000440437 MROH6A6NGR9 719 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-204ENST00000440437 FURINP09958 794 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 ARCN1P48444 511 aaKnown RBP16.36■□□□□ 0.21
COL16A1-204ENST00000440437 DNASE1L3Q13609 305 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 SEPT6Q14141 434 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 DBN1Q16643 649 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 ACVR1CQ8NER5 493 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 CT55Q8WUE5 264 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 ATG4AQ8WYN0 398 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 ZNF501Q96CX3 271 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-204ENST00000440437 CLMPQ9H6B4 373 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 KCND3Q9UK17 655 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 PADI1Q9ULC6 663 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 PCDHB3Q9Y5E6 796 aa16.36■□□□□ 0.21
COL16A1-204ENST00000440437 PSMD3O43242 534 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 CCNYL3P0C7X3 344 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 POLR2CP19387 275 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 PDHA2P29803 388 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 CD151P48509 253 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 ARL4DP49703 201 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 TUBB4BP68371 445 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 CACNG1Q06432 222 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 RPA4Q13156 261 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 TUBB2AQ13885 445 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 OASLQ15646 514 aaKnown RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 ARMC6Q6NXE6 501 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 FBXO38Q6PIJ6 1188 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 TAB3Q8N5C8 712 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 RNF10Q8N5U6 811 aaKnown RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 CLDN19Q8N6F1 224 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 SPC24Q8NBT2 197 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 OR4E2Q8NGC2 313 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 C9orf43Q8TAL5 461 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 TUBB2BQ9BVA1 445 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 VPS37BQ9H9H4 285 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 AKIRIN1Q9H9L7 192 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-204ENST00000440437 LATS2Q9NRM7 1088 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 KCNMB2Q9Y691 235 aa16.35■□□□□ 0.21
COL16A1-204ENST00000440437 SETXQ7Z333 2677 aaKnown RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 C21orf140B9A014 251 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 MATN2O00339 956 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 LIASO43766 372 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 CREG1O75629 220 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 AP2A2O94973 939 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 RECKO95980 971 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 NTRK1P04629 796 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 GSTM1P09488 218 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 MSNP26038 577 aaKnown RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 FOXN2P32314 431 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 CSRP3P50461 194 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 GSTM4Q03013 218 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 PRKAA1Q13131 559 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 ERV3-1Q14264 604 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 KRT33BQ14525 404 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 ITIH4Q14624 930 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 GPR19Q15760 415 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 TAS2R42Q7RTR8 314 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 LINC00523Q86TU6 105 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 PTRH1Q86Y79 214 aaKnown RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 OR52E1Q8NGJ3 308 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 OR52K1Q8NGK4 314 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 ABHD17AQ96GS6 310 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 FERD3LQ96RJ6 166 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 NRTNQ99748 197 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 TFB2MQ9H5Q4 396 aaKnown RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 C1GALT1Q9NS00 363 aa16.34■□□□□ 0.21
COL16A1-204ENST00000440437 UBR5O95071 2799 aaPredicted RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 SNRNP200O75643 2136 aaKnown RBP16.34■□□□□ 0.21
COL16A1-204ENST00000440437 SPTBP11277 2137 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms