RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TTC39CQ8N584 583 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARFGAP1Q8N6T3 406 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 NIPA2Q8N8Q9 360 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 PPTC7Q8NI37 304 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CSGALNACT1Q8TDX6 532 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF473Q8WTR7 871 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC114Q96M63 670 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 MCEEQ96PE7 176 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLITRK1Q96PX8 696 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCT8L2Q96SF2 557 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 BARD1Q99728 777 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC77Q9BR77 488 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SYT17Q9BSW7 474 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CENPOQ9BU64 300 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 HEMGNQ9BXL5 484 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ADGRE3Q9BY15 652 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDT1Q9H211 546 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDC42EP4Q9H3Q1 356 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 EBF3Q9H4W6 596 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RABEP2Q9H5N1 569 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM124BQ9H5Z6 455 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 EPS8L2Q9H6S3 715 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CYP3A43Q9HB55 503 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 PPANQ9NQ55 473 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FSCN3Q9NQT6 498 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 VPS51Q9UID3 782 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 GGA2Q9UJY4 613 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 KIAA1257Q9ULG3 409 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 R3HDM2Q9Y2K5 976 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 PARP14Q460N5 1801 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A0G2JMZ2 1700 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 hCG_1818297A0A087WSY0 165 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCL15-CCL14A0A0B4J2E2 113 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A1B0GUA9 196 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 LRRD1A4D1F6 860 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 F8VP50 259 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 PI4K2BG5E9Z4 385 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 GOLGA8SH3BPF8 625 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CLIC1O00299 241 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 PDHXO00330 501 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 O00370 1275 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNALI1O14645 258 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 INPPL1O15357 1258 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRAPPC3O43617 180 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 LIASO43766 372 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNOT3O75175 753 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 COQ9O75208 318 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 KIAA0754O94854 1291 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TTC4O95801 387 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SNAI1O95863 264 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM107AO95990 144 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNPP09543 421 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 HNRNPA1P09651 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 IQCF3P0C7M6 154 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMEM225BP0DP42 221 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CXCL8P10145 99 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT10P13645 584 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 HGFP14210 728 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CHN1P15882 459 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATF7P17544 494 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARF4P18085 180 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 KDELR1P24390 212 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 KLRC2P26717 231 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATP5DP30049 168 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RDXP35241 583 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RFC1P35251 1148 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RAD23BP54727 409 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDH8P55286 799 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 GSCP56915 257 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SNX16P57768 344 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 IFI35P80217 286 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC12A1Q13621 1099 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 FHL3Q13643 280 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMEM132DQ14C87 1099 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCL15Q16663 113 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 KYNUQ16719 465 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 P3H1Q32P28 736 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 DUSP28Q4G0W2 176 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TNFAIP8L3Q5GJ75 292 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TFDP3Q5H9I0 405 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ERMARDQ5T6L9 678 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CYP4A22Q5TCH4 519 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 DAB2IPQ5VWQ8 1189 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ABLIM2Q6H8Q1 611 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 JADE1Q6IE81 842 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 MFSD7Q6UXD7 560 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SCARA5Q6ZMJ2 495 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF793Q6ZN11 406 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RAB11FIP2Q7L804 512 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CPLX4Q7Z7G2 160 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF410Q86VK4 478 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RASGRP3Q8IV61 690 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 UEVLDQ8IX04 471 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 NRSN1Q8IZ57 195 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 OTUD6BQ8N6M0 293 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ALLCQ8N6M5 410 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANKRD52Q8NB46 1076 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC4A11Q8NBS3 891 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CEP70Q8NHQ1 597 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms